21 homologs were found in PanDaTox collection
for query gene Ppha_2394 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011060  Ppha_2394  hypothetical protein  100 
 
 		 87 aa  177  4.999999999999999e-44  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_011726  PCC8801_2988  restriction modification system DNA specificity domain protein  44.74 
 
 		 386 aa  70.1  0.00000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
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NC_007514  Cag_0808  specificity determinant HsdS-like  41.25 
 
 		 363 aa  68.2  0.00000000004  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.361917  n/a   
 
 
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NC_013421  Pecwa_1672  restriction modification system DNA specificity domain protein  45.12 
 
 		 493 aa  65.1  0.0000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_009665  Shew185_2194  restriction modification system DNA specificity subunit  37.5 
 
 		 427 aa  62  0.000000003  Shewanella baltica OS185  Bacteria  normal  0.122675  n/a   
 
 
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NC_007955  Mbur_1218  restriction modification system DNA specificity subunit  37.66 
 
 		 351 aa  58.5  0.00000003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.67755  n/a   
 
 
-
 
NC_007969  Pcryo_0951  restriction modification system DNA specificity subunit  34.72 
 
 		 419 aa  57.4  0.00000006  Psychrobacter cryohalolentis K5  Bacteria  normal  1  unclonable  0.0000406123 
 
 
-
 
NC_009801  EcE24377A_2910  putative type I restriction-modification system, S subunit  36.25 
 
 		 373 aa  57  0.00000008  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0102  restriction modification system DNA specificity domain protein  32.53 
 
 		 442 aa  54.3  0.0000005  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
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NC_009943  Dole_0249  restriction modification system DNA specificity subunit  31.33 
 
 		 393 aa  54.3  0.0000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_0987  restriction modification system DNA specificity subunit  42.47 
 
 		 390 aa  53.1  0.000001  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_2016  restriction modification system DNA specificity subunit  33.33 
 
 		 417 aa  49.3  0.00002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0839323  normal  1 
 
 
-
 
NC_009943  Dole_2093  restriction modification system DNA specificity subunit  35.8 
 
 		 477 aa  48.9  0.00003  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE2743  type I restriction-modification system, S subunit, truncation  32.88 
 
 		 175 aa  46.6  0.0001  Treponema denticola ATCC 35405  Bacteria  normal  0.441032  n/a   
 
 
-
 
NC_007404  Tbd_2682  putative restriction endonuclease S subunit  35.71 
 
 		 400 aa  45.4  0.0003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.845062  normal  1 
 
 
-
 
NC_009523  RoseRS_0735  restriction modification system DNA specificity subunit  30 
 
 		 392 aa  45.1  0.0004  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.142305 
 
 
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NC_009565  TBFG_12768  type I restriction/modification system specificity determinant hsdS.1  28.05 
 
 		 91 aa  43.5  0.0009  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_0333  restriction modification system DNA specificity subunit  41.18 
 
 		 371 aa  43.5  0.001  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_2176  restriction modification system DNA specificity subunit  28 
 
 		 444 aa  42.4  0.002  Xylella fastidiosa M23  Bacteria  normal  0.962317  n/a   
 
 
-
 
NC_011662  Tmz1t_0005  restriction modification system DNA specificity domain protein  43.64 
 
 		 378 aa  41.6  0.004  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_4348  restriction modification system DNA specificity subunit  27.85 
 
 		 363 aa  41.2  0.005  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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