13 homologs were found in PanDaTox collection
for query gene Ppha_1833 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008639  Cpha266_1229  succinylglutamate desuccinylase/aspartoacylase  89.02 
 
 
355 aa  637    Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1224  succinylglutamate desuccinylase/aspartoacylase  88.73 
 
 
347 aa  638    Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1833  succinylglutamate desuccinylase/aspartoacylase  100 
 
 
347 aa  713    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2113  hypothetical protein  52.03 
 
 
353 aa  375  1e-103  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0842799  normal  0.0230075 
 
 
-
 
NC_011059  Paes_1912  succinylglutamate desuccinylase/aspartoacylase  51.79 
 
 
342 aa  350  1e-95  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0559  succinylglutamate desuccinylase/aspartoacylase  44.31 
 
 
340 aa  267  2.9999999999999995e-70  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0195  succinylglutamate desuccinylase/aspartoacylase  44.05 
 
 
335 aa  264  2e-69  Alkalilimnicola ehrlichii MLHE-1  Bacteria  unclonable  0.00000014787  normal 
 
 
-
 
NC_007484  Noc_2287  hypothetical protein  42.46 
 
 
340 aa  258  1e-67  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.377125  n/a   
 
 
-
 
NC_008789  Hhal_1016  succinylglutamate desuccinylase/aspartoacylase  40.9 
 
 
339 aa  233  3e-60  Halorhodospira halophila SL1  Bacteria  normal  0.105203  n/a   
 
 
-
 
NC_013889  TK90_2306  succinylglutamate desuccinylase/aspartoacylase  39.46 
 
 
337 aa  217  2.9999999999999998e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0235263  normal  0.0574212 
 
 
-
 
NC_013440  Hoch_5063  hypothetical protein  32.61 
 
 
347 aa  109  7.000000000000001e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2275  hypothetical protein  24.4 
 
 
355 aa  75.1  0.000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.175878  n/a   
 
 
-
 
NC_008709  Ping_1741  hypothetical protein  24.4 
 
 
345 aa  73.6  0.000000000005  Psychromonas ingrahamii 37  Bacteria  normal  0.126452  normal 
 
 
-
 
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