17 homologs were found in PanDaTox collection
for query gene Pnap_4358 on replicon NC_008757
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008757  Pnap_4358  hypothetical protein  100 
 
 
287 aa  603  9.999999999999999e-173  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0722174  normal  0.346082 
 
 
-
 
NC_007953  Bxe_C0677  hypothetical protein  62.34 
 
 
153 aa  196  3e-49  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.651291 
 
 
-
 
NC_008786  Veis_1570  hypothetical protein  39.63 
 
 
272 aa  184  1.0000000000000001e-45  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.553131  unclonable  0.0000135434 
 
 
-
 
NC_006368  lpp0187  hypothetical protein  38.29 
 
 
269 aa  158  8e-38  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007953  Bxe_C0678  hypothetical protein  58.43 
 
 
110 aa  102  1e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.45859  normal  0.914458 
 
 
-
 
NC_008025  Dgeo_2092  metallo-beta-lactamase superfamily hydrolase-like protein  32.68 
 
 
331 aa  54.3  0.000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.214294  normal 
 
 
-
 
NC_008148  Rxyl_0044  beta-lactamase-like protein  27.17 
 
 
291 aa  47.4  0.0002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1571  metallo-beta-lactamase superfamily hydrolase  25.42 
 
 
320 aa  45.4  0.001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.993605  hitchhiker  0.000158628 
 
 
-
 
NC_011725  BCB4264_A4445  DNA internalization-related competence protein ComEC/Rec2  35.14 
 
 
773 aa  45.1  0.001  Bacillus cereus B4264  Bacteria  normal  0.0495736  n/a   
 
 
-
 
NC_011658  BCAH187_A4458  DNA internalization-related competence protein ComEC/Rec2  26.63 
 
 
773 aa  44.3  0.002  Bacillus cereus AH187  Bacteria  hitchhiker  0.00283851  n/a   
 
 
-
 
NC_008346  Swol_1595  DNA internalization-related competence protein ComEC/Rec2  28.57 
 
 
761 aa  43.9  0.003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4406  DNA internalization-related competence protein ComEC/Rec2  26.63 
 
 
773 aa  44.3  0.003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0792  DNA internalization-related competence protein ComEC/Rec2  33.78 
 
 
773 aa  43.1  0.005  Bacillus cereus G9842  Bacteria  normal  0.92497  hitchhiker  0.0000000434572 
 
 
-
 
NC_012034  Athe_1235  beta-lactamase domain protein  26.47 
 
 
295 aa  42.7  0.006  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000521991  n/a   
 
 
-
 
NC_009012  Cthe_2752  beta-lactamase-like protein  22.61 
 
 
443 aa  42.4  0.009  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1139  metallo-beta-lactamase superfamily hydrolase  29.63 
 
 
336 aa  42.4  0.01  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.187703  normal  0.0577692 
 
 
-
 
NC_011899  Hore_12920  DNA internalization-related competence protein ComEC/Rec2  23.13 
 
 
775 aa  42  0.01  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000012809  n/a   
 
 
-
 
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