9 homologs were found in PanDaTox collection
for query gene Pnap_3188 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_3188  exopolysaccharide biosynthesis protein-like protein  100 
 
 
296 aa  612  9.999999999999999e-175  Polaromonas naphthalenivorans CJ2  Bacteria  hitchhiker  0.00782189  hitchhiker  0.00453447 
 
 
-
 
NC_010506  Swoo_0071  exopolysaccharide biosynthesis protein-like protein  30.38 
 
 
298 aa  137  2e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.019972 
 
 
-
 
NC_010498  EcSMS35_2256  hypothetical protein  32.53 
 
 
269 aa  123  3e-27  Escherichia coli SMS-3-5  Bacteria  normal  0.803632  normal 
 
 
-
 
NC_010571  Oter_2503  hypothetical protein  25.17 
 
 
356 aa  72.8  0.000000000007  Opitutus terrae PB90-1  Bacteria  normal  0.394231  normal 
 
 
-
 
NC_010571  Oter_3262  hypothetical protein  25.51 
 
 
293 aa  63.2  0.000000006  Opitutus terrae PB90-1  Bacteria  normal  0.249418  normal  0.24171 
 
 
-
 
NC_007952  Bxe_B1722  hypothetical protein  24.54 
 
 
317 aa  49.7  0.00006  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.257484 
 
 
-
 
NC_008148  Rxyl_3094  hypothetical protein  22.94 
 
 
287 aa  48.1  0.0002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2968  polysaccharide pyruvyl transferase  59.46 
 
 
343 aa  45.1  0.001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.41225  normal 
 
 
-
 
NC_012850  Rleg_3217  polysaccharide pyruvyl transferase  59.46 
 
 
334 aa  45.1  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
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