12 homologs were found in PanDaTox collection
for query gene Pnap_3053 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_3053  hypothetical protein  100 
 
 
643 aa  1314    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5078  hypothetical protein  48.66 
 
 
809 aa  199  1.0000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  0.126059  normal  0.0204601 
 
 
-
 
NC_010511  M446_1140  hypothetical protein  39.62 
 
 
294 aa  195  2e-48  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1434  hypothetical protein  44.96 
 
 
772 aa  191  2.9999999999999997e-47  Frankia sp. CcI3  Bacteria  normal  0.709183  normal  0.106581 
 
 
-
 
NC_013131  Caci_4046  hypothetical protein  28.33 
 
 
624 aa  172  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00161846  normal  0.0746205 
 
 
-
 
NC_013131  Caci_7435  hypothetical protein  28.33 
 
 
624 aa  172  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4030  hypothetical protein  38.75 
 
 
298 aa  166  1.0000000000000001e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.102494  n/a   
 
 
-
 
NC_009767  Rcas_2034  hypothetical protein  32.54 
 
 
371 aa  105  2e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1755  hypothetical protein  32.86 
 
 
336 aa  104  6e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.459643  normal  0.448559 
 
 
-
 
NC_009972  Haur_2935  hypothetical protein  32.81 
 
 
341 aa  84.3  0.000000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000152042  n/a   
 
 
-
 
NC_011831  Cagg_0409  hypothetical protein  30.49 
 
 
519 aa  70.5  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.241888  normal 
 
 
-
 
NC_013947  Snas_2762  hypothetical protein  25.52 
 
 
527 aa  53.5  0.00001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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