9 homologs were found in PanDaTox collection
for query gene Pnap_2055 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_2055  hypothetical protein  100 
 
 
199 aa  407  1e-113  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2723  hypothetical protein  49.25 
 
 
267 aa  181  7e-45  Polaromonas sp. JS666  Bacteria  normal  normal  0.2083 
 
 
-
 
NC_007948  Bpro_1801  hypothetical protein  37.8 
 
 
237 aa  123  1e-27  Polaromonas sp. JS666  Bacteria  normal  unclonable  0.00000263268 
 
 
-
 
NC_008781  Pnap_1364  hypothetical protein  40.83 
 
 
260 aa  118  4.9999999999999996e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.734577  hitchhiker  0.00420944 
 
 
-
 
NC_007948  Bpro_1520  hypothetical protein  40 
 
 
286 aa  116  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3159  hypothetical protein  25.87 
 
 
239 aa  75.9  0.0000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0111438 
 
 
-
 
NC_010524  Lcho_0553  hypothetical protein  28.47 
 
 
269 aa  73.6  0.000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_0375  hypothetical protein  22.6 
 
 
275 aa  42.7  0.003  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00333316 
 
 
-
 
NC_008825  Mpe_A3221  hypothetical protein  23.68 
 
 
267 aa  41.2  0.01  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.34807 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>