14 homologs were found in PanDaTox collection
for query gene Pnap_0088 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_0088  hypothetical protein  100 
 
 
139 aa  283  7e-76  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0639002  normal 
 
 
-
 
NC_007298  Daro_2916  hypothetical protein  51.8 
 
 
145 aa  125  2.0000000000000002e-28  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.247964 
 
 
-
 
NC_007802  Jann_2974  hypothetical protein  46.77 
 
 
179 aa  57.4  0.00000006  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000963506  normal  0.230267 
 
 
-
 
NC_007413  Ava_1496  hypothetical protein  36.92 
 
 
170 aa  49.3  0.00002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0605  hypothetical protein  34.33 
 
 
89 aa  47.4  0.00007  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00151765  n/a   
 
 
-
 
NC_008609  Ppro_1850  hypothetical protein  32.5 
 
 
149 aa  46.6  0.0001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2596  hypothetical protein  37.04 
 
 
80 aa  43.5  0.0009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1630  hypothetical protein  34.38 
 
 
81 aa  43.1  0.001  Thermosipho melanesiensis BI429  Bacteria  normal  0.265757  n/a   
 
 
-
 
NC_009664  Krad_3984  hypothetical protein  43.64 
 
 
99 aa  41.2  0.005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.714096 
 
 
-
 
NC_011884  Cyan7425_3440  hypothetical protein  40.38 
 
 
94 aa  40.8  0.007  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.0000360977 
 
 
-
 
NC_014151  Cfla_0257  hypothetical protein  45.76 
 
 
96 aa  40.4  0.007  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4430  hypothetical protein  33.33 
 
 
70 aa  40.4  0.008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_912  hypothetical protein  34.33 
 
 
70 aa  40.4  0.008  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000074763  n/a   
 
 
-
 
NC_011831  Cagg_3146  protein of unknown function DUF37  37.31 
 
 
70 aa  40  0.01  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.848373  normal 
 
 
-
 
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