11 homologs were found in PanDaTox collection
for query gene Pmen_0141 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_0141  hypothetical protein  100 
 
 
213 aa  427  1e-119  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0116  hypothetical protein  68.42 
 
 
213 aa  289  2e-77  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0054252 
 
 
-
 
NC_009512  Pput_0118  hypothetical protein  67.94 
 
 
213 aa  288  6e-77  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0080  hypothetical protein  66.35 
 
 
210 aa  286  2e-76  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0121  hypothetical protein  66.51 
 
 
213 aa  279  3e-74  Pseudomonas putida W619  Bacteria  normal  0.209654  normal  0.54813 
 
 
-
 
NC_004578  PSPTO_5257  hypothetical protein  63.68 
 
 
216 aa  271  6e-72  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0286  hypothetical protein  64.62 
 
 
216 aa  271  7e-72  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_01040  hypothetical protein  63.68 
 
 
216 aa  270  9e-72  Azotobacter vinelandii DJ  Bacteria  hitchhiker  0.00419663  n/a   
 
 
-
 
NC_009656  PSPA7_0177  hypothetical protein  64.45 
 
 
212 aa  270  1e-71  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0033  hypothetical protein  41.55 
 
 
225 aa  176  2e-43  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0060  hypothetical protein  40.37 
 
 
228 aa  118  4.9999999999999996e-26  Marinobacter aquaeolei VT8  Bacteria  normal  0.457239  n/a   
 
 
-
 
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