5 homologs were found in PanDaTox collection
for query gene Pmen_0029 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_0029  YscI/HrpB family type III secretion apparatus protein  100 
 
 		 122 aa  246  1e-64  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1383  type III secretion protein HrpB  53.54 
 
 		 124 aa  110  5e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1194  type III secretion protein HrpB  47.62 
 
 		 124 aa  100  6e-21  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.0951836 
 
 
-
 
NC_012912  Dd1591_1898  type III secretion apparatus protein, YscI/HrpB family  31.07 
 
 		 122 aa  52.8  0.000002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_2198  type III secretion apparatus protein, YscI/HrpB family  29.17 
 
 		 123 aa  42.7  0.001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>