10 homologs were found in PanDaTox collection
for query gene Plim_2750 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_2750  transport-associated protein  100 
 
 
148 aa  300  7.000000000000001e-81  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1119  putative phophoslipid binding protein  42.42 
 
 
140 aa  75.5  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  unclonable  0.0000111186 
 
 
-
 
NC_012918  GM21_2741  transport-associated protein  34.31 
 
 
140 aa  72  0.000000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1030  transport-associated protein  33.1 
 
 
150 aa  68.9  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3235  transport-associated  30.99 
 
 
147 aa  64.3  0.0000000005  Geobacter bemidjiensis Bem  Bacteria  normal  0.026553  n/a   
 
 
-
 
NC_013173  Dbac_1191  transport-associated  39.19 
 
 
207 aa  55.8  0.0000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0614  type II and III secretion system protein  30.91 
 
 
464 aa  42.4  0.002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3339  transport-associated  30.99 
 
 
198 aa  42.4  0.002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3822  transport-associated  35.71 
 
 
210 aa  41.2  0.005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.139226  hitchhiker  0.00915179 
 
 
-
 
NC_007948  Bpro_0874  transport-associated  29.45 
 
 
163 aa  40  0.01  Polaromonas sp. JS666  Bacteria  normal  normal  0.586964 
 
 
-
 
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