47 homologs were found in PanDaTox collection
for query gene Plim_1100 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014148  Plim_1100  response regulator receiver domain-containing protein  100 
 
 		 154 aa  315  2e-85  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0564  response regulator receiver domain-containing protein  46.46 
 
 		 137 aa  114  5e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_4626  response regulator receiver protein  33.8 
 
 		 150 aa  108  2.0000000000000002e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.716326  n/a   
 
 
-
 
NC_008543  Bcen2424_3738  response regulator receiver protein  33.8 
 
 		 150 aa  108  2.0000000000000002e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  0.174307  normal  0.0184416 
 
 
-
 
NC_009622  Smed_6521  response regulator receiver protein  39.13 
 
 		 151 aa  104  5e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.557152  normal  0.106404 
 
 
-
 
NC_007614  Nmul_A0543  response regulator receiver domain-containing protein  33.1 
 
 		 162 aa  92.4  2e-18  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_0302  response regulator  30.28 
 
 		 149 aa  82  0.000000000000003  Escherichia coli SMS-3-5  Bacteria  normal  0.0396154  decreased coverage  0.00000818495 
 
 
-
 
NC_011370  Rleg2_6155  response regulator receiver protein  32.24 
 
 		 151 aa  77.4  0.00000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.831592  normal  1 
 
 
-
 
NC_009665  Shew185_3243  response regulator receiver protein  24.14 
 
 		 146 aa  60.1  0.00000001  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_2304  response regulator receiver protein  33.7 
 
 		 150 aa  48.9  0.00002  Magnetococcus sp. MC-1  Bacteria  normal  0.0766818  normal  0.411617 
 
 
-
 
NC_007778  RPB_3317  response regulator receiver domain-containing protein  25.87 
 
 		 152 aa  47.8  0.00005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.147555  normal  0.138584 
 
 
-
 
NC_011146  Gbem_2494  PAS/PAC sensor hybrid histidine kinase  29.79 
 
 		 663 aa  46.6  0.0001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  33.33 
 
 		 383 aa  47  0.0001  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_008340  Mlg_2671  response regulator receiver protein  31.58 
 
 		 243 aa  45.8  0.0002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  hitchhiker  0.000000000586434 
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  30.09 
 
 		 338 aa  45.4  0.0003  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1723  multi-sensor hybrid histidine kinase  28.72 
 
 		 664 aa  45.1  0.0004  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013510  Tcur_2645  response regulator receiver protein  33.33 
 
 		 215 aa  45.1  0.0004  Thermomonospora curvata DSM 43183  Bacteria  normal  0.492308  n/a   
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  37.8 
 
 		 331 aa  44.7  0.0005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_009921  Franean1_0667  response regulator receiver protein  30 
 
 		 214 aa  44.3  0.0006  Frankia sp. EAN1pec  Bacteria  normal  0.0467725  normal  0.629252 
 
 
-
 
NC_011729  PCC7424_3765  multi-sensor signal transduction histidine kinase  28.72 
 
 		 562 aa  43.9  0.0007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.13531 
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  31.18 
 
 		 457 aa  43.9  0.0009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_008554  Sfum_2304  multi-sensor hybrid histidine kinase  30.11 
 
 		 870 aa  43.5  0.001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_3007  signal transduction histidine kinase, nitrogen specific, NtrB  27.66 
 
 		 507 aa  43.1  0.001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.738719  normal  1 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  29.35 
 
 		 337 aa  43.5  0.001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_010524  Lcho_1401  response regulator receiver sensor signal transduction histidine kinase  30.11 
 
 		 384 aa  42.4  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  34.02 
 
 		 331 aa  42.4  0.002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  32.81 
 
 		 331 aa  42.4  0.002  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal  1 
 
 
-
 
NC_012803  Mlut_02970  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.63 
 
 		 227 aa  42  0.003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.611463  n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  30.11 
 
 		 375 aa  41.6  0.004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  27.66 
 
 		 239 aa  41.6  0.004  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  27.34 
 
 		 228 aa  41.6  0.004  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  30.86 
 
 		 434 aa  41.2  0.005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_012669  Bcav_0856  response regulator receiver protein  29.41 
 
 		 126 aa  41.2  0.005  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.0534273 
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  30.86 
 
 		 434 aa  41.2  0.005  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  31.71 
 
 		 314 aa  41.2  0.005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_47610  encystment and alginate biosynthesis response regulator; AlgR  28.7 
 
 		 251 aa  41.2  0.006  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0143  response regulator receiver protein  30.19 
 
 		 206 aa  41.2  0.006  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  31.31 
 
 		 225 aa  40.8  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_007777  Francci3_4048  response regulator receiver protein  29 
 
 		 241 aa  40.8  0.007  Frankia sp. CcI3  Bacteria  normal  0.916406  normal  1 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  29.59 
 
 		 217 aa  40.8  0.007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_007575  Suden_1034  response regulator receiver domain-containing protein  32.99 
 
 		 120 aa  40.4  0.008  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.114962  n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  34.15 
 
 		 312 aa  40.8  0.008  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_007798  NSE_0512  response regulator PleD  28.93 
 
 		 456 aa  40.4  0.008  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2563  periplasmic sensor hybrid histidine kinase  26.61 
 
 		 935 aa  40.4  0.009  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.851477 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  27.17 
 
 		 331 aa  40.4  0.009  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  31.43 
 
 		 377 aa  40.4  0.009  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_007802  Jann_1533  response regulator receiver domain-containing protein  19.31 
 
 		 149 aa  40.4  0.01  Jannaschia sp. CCS1  Bacteria  normal  0.0503876  normal  0.244414 
 
 
-
 
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