More than 300 homologs were found in PanDaTox collection
for query gene Plav_0964 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_0964  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
375 aa  761    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.367586  normal 
 
 
-
 
NC_007778  RPB_1687  Acyl-CoA dehydrogenase-like  57.98 
 
 
375 aa  440  9.999999999999999e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.473002  normal  0.801014 
 
 
-
 
NC_007958  RPD_3606  acyl-CoA dehydrogenase-like  59.04 
 
 
375 aa  432  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.343356  normal 
 
 
-
 
NC_009485  BBta_7118  putative acyl-CoA dehydrogenase  56.38 
 
 
375 aa  431  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.695854 
 
 
-
 
NC_011004  Rpal_1908  acyl-CoA dehydrogenase domain protein  58.78 
 
 
375 aa  420  1e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.195445  n/a   
 
 
-
 
NC_009719  Plav_1031  acyl-CoA dehydrogenase domain-containing protein  52.93 
 
 
371 aa  399  9.999999999999999e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.818052  normal 
 
 
-
 
NC_007925  RPC_2197  acyl-CoA dehydrogenase-like  53.72 
 
 
375 aa  396  1e-109  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3427  acyl-CoA dehydrogenase domain-containing protein  53.72 
 
 
371 aa  377  1e-103  Caulobacter sp. K31  Bacteria  normal  0.143009  normal  0.517094 
 
 
-
 
NC_009511  Swit_1603  acyl-CoA dehydrogenase domain-containing protein  52.27 
 
 
372 aa  351  1e-95  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3398  acyl-CoA dehydrogenase domain-containing protein  42.78 
 
 
366 aa  296  4e-79  Sphingomonas wittichii RW1  Bacteria  normal  0.157056  decreased coverage  0.00584794 
 
 
-
 
NC_008048  Sala_1633  acyl-CoA dehydrogenase-like protein  47.14 
 
 
363 aa  270  4e-71  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0193682  normal  0.810122 
 
 
-
 
NC_008048  Sala_1247  acyl-CoA dehydrogenase-like protein  37.33 
 
 
364 aa  203  3e-51  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.457334  normal 
 
 
-
 
NC_009921  Franean1_5573  acyl-CoA dehydrogenase domain-containing protein  33.08 
 
 
392 aa  199  6e-50  Frankia sp. EAN1pec  Bacteria  normal  0.33081  normal 
 
 
-
 
NC_009719  Plav_1873  acyl-CoA dehydrogenase domain-containing protein  35.65 
 
 
364 aa  197  3e-49  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.25852 
 
 
-
 
NC_009901  Spea_2175  acyl-CoA dehydrogenase domain-containing protein  34.18 
 
 
401 aa  196  4.0000000000000005e-49  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5275  acyl-CoA dehydrogenase-like protein  34.57 
 
 
385 aa  191  2e-47  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5364  acyl-CoA dehydrogenase domain-containing protein  34.57 
 
 
385 aa  191  2e-47  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5654  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
385 aa  190  2.9999999999999997e-47  Mycobacterium sp. JLS  Bacteria  normal  0.693772  normal 
 
 
-
 
NC_013510  Tcur_1878  acyl-CoA dehydrogenase domain protein  36.86 
 
 
369 aa  189  7e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0940842  n/a   
 
 
-
 
NC_008726  Mvan_4312  acyl-CoA dehydrogenase domain-containing protein  34.54 
 
 
364 aa  189  9e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.450465 
 
 
-
 
NC_007953  Bxe_C0702  putative acyl-CoA dehydrogenase  34.2 
 
 
384 aa  186  8e-46  Burkholderia xenovorans LB400  Bacteria  normal  0.307402  normal  0.791276 
 
 
-
 
NC_009511  Swit_3632  acyl-CoA dehydrogenase domain-containing protein  34.32 
 
 
354 aa  185  1.0000000000000001e-45  Sphingomonas wittichii RW1  Bacteria  normal  0.876605  normal  0.772709 
 
 
-
 
NC_009338  Mflv_2335  acyl-CoA dehydrogenase domain-containing protein  36.28 
 
 
363 aa  184  2.0000000000000003e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.607114 
 
 
-
 
NC_007974  Rmet_4575  acyl-CoA dehydrogenase-like protein  35.1 
 
 
379 aa  182  8.000000000000001e-45  Cupriavidus metallidurans CH34  Bacteria  normal  0.0903077  normal  0.010992 
 
 
-
 
NC_007517  Gmet_2198  Acyl-CoA dehydrogenase-like  33.51 
 
 
378 aa  182  9.000000000000001e-45  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000106559  hitchhiker  0.00491627 
 
 
-
 
NC_008347  Mmar10_1653  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
379 aa  181  2e-44  Maricaulis maris MCS10  Bacteria  normal  normal  0.257956 
 
 
-
 
NC_009338  Mflv_0345  acyl-CoA dehydrogenase domain-containing protein  34.1 
 
 
389 aa  181  2.9999999999999997e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0926  acyl-CoA dehydrogenase domain protein  37.27 
 
 
373 aa  178  1e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16740  acyl-CoA dehydrogenase  36.68 
 
 
389 aa  178  1e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0979  Acyl-CoA dehydrogenase, C-terminal  33.8 
 
 
372 aa  177  3e-43  Ralstonia eutropha JMP134  Bacteria  normal  0.525022  n/a   
 
 
-
 
NC_007778  RPB_4674  Acyl-CoA dehydrogenase-like  32.41 
 
 
379 aa  176  5e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4583  acyl-CoA dehydrogenase domain-containing protein  33.95 
 
 
371 aa  175  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  0.277909  normal  0.943502 
 
 
-
 
NC_008048  Sala_3078  acyl-CoA dehydrogenase-like protein  34.65 
 
 
372 aa  175  9.999999999999999e-43  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0945  acyl-CoA dehydrogenase-like protein  32.96 
 
 
372 aa  174  1.9999999999999998e-42  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1635  acyl-CoA dehydrogenase-like protein  38.24 
 
 
362 aa  174  1.9999999999999998e-42  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.787529  normal  0.547855 
 
 
-
 
NC_010002  Daci_5375  acyl-CoA dehydrogenase domain-containing protein  34.38 
 
 
371 aa  173  3.9999999999999995e-42  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.932772 
 
 
-
 
NC_011004  Rpal_5284  acyl-CoA dehydrogenase domain protein  32.78 
 
 
379 aa  172  9e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.245175  n/a   
 
 
-
 
NC_009719  Plav_1806  acyl-CoA dehydrogenase domain-containing protein  31.28 
 
 
361 aa  172  9e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.133917  normal 
 
 
-
 
NC_010338  Caul_1445  acyl-CoA dehydrogenase domain-containing protein  33.52 
 
 
377 aa  171  1e-41  Caulobacter sp. K31  Bacteria  normal  0.837233  normal  0.259915 
 
 
-
 
NC_008726  Mvan_4007  acyl-CoA dehydrogenase domain-containing protein  32.62 
 
 
365 aa  172  1e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11962  acyl-CoA dehydrogenase fadE18  32.76 
 
 
363 aa  171  2e-41  Mycobacterium tuberculosis F11  Bacteria  normal  0.618058  normal  0.535978 
 
 
-
 
NC_007958  RPD_4383  acyl-CoA dehydrogenase-like  33.43 
 
 
379 aa  171  2e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7780  putative acyl-CoA dehydrogenase  33.42 
 
 
377 aa  171  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2619  acyl-CoA dehydrogenase domain-containing protein  34.27 
 
 
366 aa  168  1e-40  Salinispora tropica CNB-440  Bacteria  normal  0.0175274  normal  0.715708 
 
 
-
 
NC_009077  Mjls_5570  acyl-CoA dehydrogenase domain-containing protein  30.77 
 
 
385 aa  169  1e-40  Mycobacterium sp. JLS  Bacteria  normal  0.0891076  normal 
 
 
-
 
NC_009077  Mjls_4134  acyl-CoA dehydrogenase domain-containing protein  35.17 
 
 
386 aa  167  2.9999999999999998e-40  Mycobacterium sp. JLS  Bacteria  normal  normal  0.856762 
 
 
-
 
NC_009485  BBta_0703  putative acyl-CoA dehydrogenase  33.15 
 
 
379 aa  167  4e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5189  acyl-CoA dehydrogenase-like protein  30.49 
 
 
385 aa  167  4e-40  Mycobacterium sp. MCS  Bacteria  normal  0.454654  n/a   
 
 
-
 
NC_008705  Mkms_5278  acyl-CoA dehydrogenase domain-containing protein  30.49 
 
 
385 aa  167  4e-40  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3761  acyl-CoA dehydrogenase domain-containing protein  32.27 
 
 
351 aa  165  1.0000000000000001e-39  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.637859  n/a   
 
 
-
 
NC_013744  Htur_4372  acyl-CoA dehydrogenase domain protein  31.37 
 
 
374 aa  165  1.0000000000000001e-39  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.367452  n/a   
 
 
-
 
NC_009921  Franean1_3585  acyl-CoA dehydrogenase domain-containing protein  32.15 
 
 
396 aa  163  4.0000000000000004e-39  Frankia sp. EAN1pec  Bacteria  normal  normal  0.399913 
 
 
-
 
NC_013757  Gobs_2178  acyl-CoA dehydrogenase domain protein  33.05 
 
 
383 aa  163  5.0000000000000005e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_007948  Bpro_3846  acyl-CoA dehydrogenase-like  32.45 
 
 
371 aa  163  5.0000000000000005e-39  Polaromonas sp. JS666  Bacteria  normal  normal  0.94503 
 
 
-
 
NC_013131  Caci_5360  acyl-CoA dehydrogenase domain protein  30.94 
 
 
373 aa  161  1e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5602  acyl-CoA dehydrogenase domain-containing protein  31.72 
 
 
416 aa  162  1e-38  Frankia sp. EAN1pec  Bacteria  normal  0.364458  hitchhiker  0.00573263 
 
 
-
 
NC_007908  Rfer_1645  acyl-CoA dehydrogenase-like  31.41 
 
 
371 aa  162  1e-38  Rhodoferax ferrireducens T118  Bacteria  normal  0.700839  n/a   
 
 
-
 
NC_012856  Rpic12D_1873  acyl-CoA dehydrogenase domain protein  31.78 
 
 
376 aa  161  2e-38  Ralstonia pickettii 12D  Bacteria  normal  0.451558  normal  0.28146 
 
 
-
 
NC_013131  Caci_1154  acyl-CoA dehydrogenase domain protein  32.36 
 
 
373 aa  160  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2196  acyl-CoA dehydrogenase domain protein  31.78 
 
 
376 aa  160  5e-38  Ralstonia pickettii 12J  Bacteria  normal  normal  0.341698 
 
 
-
 
NC_009953  Sare_2818  acyl-CoA dehydrogenase domain-containing protein  34.27 
 
 
390 aa  160  5e-38  Salinispora arenicola CNS-205  Bacteria  normal  0.447416  hitchhiker  0.00100793 
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  31.65 
 
 
380 aa  159  5e-38  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010333  Caul_5299  acyl-CoA dehydrogenase domain-containing protein  31.56 
 
 
362 aa  159  5e-38  Caulobacter sp. K31  Bacteria  normal  0.797236  normal  0.678656 
 
 
-
 
NC_009921  Franean1_1624  acyl-CoA dehydrogenase domain-containing protein  31.23 
 
 
379 aa  159  5e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2204  acyl-CoA dehydrogenase domain-containing protein  29.16 
 
 
379 aa  159  6e-38  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0189633  normal 
 
 
-
 
NC_009077  Mjls_2573  acyl-CoA dehydrogenase domain-containing protein  32.5 
 
 
374 aa  159  6e-38  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0232  acyl-CoA dehydrogenase domain protein  32.88 
 
 
382 aa  159  7e-38  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.359869 
 
 
-
 
NC_014165  Tbis_0801  acyl-CoA dehydrogenase domain-containing protein  34.67 
 
 
736 aa  159  7e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  30.18 
 
 
379 aa  159  8e-38  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2718  acyl-CoA dehydrogenase domain-containing protein  31.44 
 
 
383 aa  158  1e-37  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2177  acyl-CoA dehydrogenase domain protein  33.69 
 
 
732 aa  157  2e-37  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000163847  n/a   
 
 
-
 
NC_013510  Tcur_1476  acyl-CoA dehydrogenase domain protein  33.98 
 
 
367 aa  158  2e-37  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0077917  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  31.62 
 
 
380 aa  157  2e-37  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  31.79 
 
 
377 aa  157  3e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_013510  Tcur_2603  acyl-CoA dehydrogenase domain protein  34.37 
 
 
719 aa  157  3e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.035645  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  30.18 
 
 
379 aa  157  4e-37  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_3225  acyl-CoA dehydrogenase domain-containing protein  31.55 
 
 
371 aa  156  5.0000000000000005e-37  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3534  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  29.86 
 
 
377 aa  155  8e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1742  acyl-CoA dehydrogenase-like protein  29.3 
 
 
380 aa  155  1e-36  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3727  acyl-CoA dehydrogenase domain-containing protein  33.06 
 
 
378 aa  155  1e-36  Nocardioides sp. JS614  Bacteria  normal  0.0588386  n/a   
 
 
-
 
NC_008705  Mkms_1789  acyl-CoA dehydrogenase domain-containing protein  29.3 
 
 
380 aa  155  1e-36  Mycobacterium sp. KMS  Bacteria  normal  0.662681  normal 
 
 
-
 
NC_003295  RSc2044  putative acyl-CoA dehydrogenase oxidoreductase protein  30.99 
 
 
376 aa  154  2.9999999999999998e-36  Ralstonia solanacearum GMI1000  Bacteria  normal  0.761176  normal  0.220022 
 
 
-
 
NC_012791  Vapar_1273  acyl-CoA dehydrogenase domain protein  30.53 
 
 
371 aa  154  2.9999999999999998e-36  Variovorax paradoxus S110  Bacteria  normal  0.592297  n/a   
 
 
-
 
NC_013202  Hmuk_3108  acyl-CoA dehydrogenase domain protein  30.62 
 
 
380 aa  153  5e-36  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013595  Sros_2105  acyl-CoA dehydrogenase domain-containing protein  31.98 
 
 
323 aa  153  5e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0335417  normal 
 
 
-
 
NC_007333  Tfu_2310  putative acyl-CoA dehydrogenase  34.7 
 
 
377 aa  152  5.9999999999999996e-36  Thermobifida fusca YX  Bacteria  normal  0.858496  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  30.62 
 
 
379 aa  152  7e-36  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2910  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
372 aa  152  7e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0705936  hitchhiker  0.00613875 
 
 
-
 
NC_010512  Bcenmc03_6833  acyl-CoA dehydrogenase domain-containing protein  29.86 
 
 
386 aa  152  8e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.508275  normal 
 
 
-
 
NC_011992  Dtpsy_2732  acyl-CoA dehydrogenase domain protein  31.15 
 
 
371 aa  152  1e-35  Acidovorax ebreus TPSY  Bacteria  normal  0.226148  n/a   
 
 
-
 
NC_013441  Gbro_0689  acyl-CoA dehydrogenase domain protein  30.34 
 
 
370 aa  152  1e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  30.54 
 
 
380 aa  150  3e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008782  Ajs_3394  acyl-CoA dehydrogenase domain-containing protein  31.15 
 
 
371 aa  150  4e-35  Acidovorax sp. JS42  Bacteria  normal  normal  0.396655 
 
 
-
 
NC_012029  Hlac_1318  acyl-CoA dehydrogenase domain protein  30.79 
 
 
384 aa  150  4e-35  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.0793911 
 
 
-
 
NC_010524  Lcho_1239  acyl-CoA dehydrogenase domain-containing protein  31.04 
 
 
379 aa  150  5e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.384683 
 
 
-
 
NC_008786  Veis_2105  acyl-CoA dehydrogenase domain-containing protein  31.02 
 
 
371 aa  149  7e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2697  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
384 aa  149  8e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.963882 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  32.98 
 
 
380 aa  149  8e-35  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3549  acyl-CoA dehydrogenase-like  29.67 
 
 
380 aa  149  9e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  29.54 
 
 
402 aa  148  1.0000000000000001e-34  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
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