9 homologs were found in PanDaTox collection
for query gene Ping_3056 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_3056  hypothetical protein  100 
 
 
874 aa  1770    Psychromonas ingrahamii 37  Bacteria  normal  normal  0.136617 
 
 
-
 
NC_007950  Bpro_5310  hypothetical protein  26.77 
 
 
803 aa  68.9  0.0000000004  Polaromonas sp. JS666  Bacteria  normal  0.651081  normal 
 
 
-
 
NC_008639  Cpha266_1757  hypothetical protein  24.76 
 
 
930 aa  57.4  0.000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1213  hypothetical protein  24.07 
 
 
908 aa  52.4  0.00004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0613  hypothetical protein  25.48 
 
 
1043 aa  49.3  0.0003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0089  TonB-dependent receptor  32.1 
 
 
957 aa  45.8  0.004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.012532 
 
 
-
 
NC_010678  Rpic_3811  fimbrial biogenesis outer membrane usher protein  28.19 
 
 
875 aa  45.4  0.004  Ralstonia pickettii 12J  Bacteria  normal  0.647139  normal  0.153634 
 
 
-
 
NC_012857  Rpic12D_3924  fimbrial biogenesis outer membrane usher protein  28.19 
 
 
875 aa  45.4  0.004  Ralstonia pickettii 12D  Bacteria  normal  0.215778  normal  0.607518 
 
 
-
 
NC_012856  Rpic12D_0832  fimbrial biogenesis outer membrane usher protein  28.46 
 
 
853 aa  44.7  0.008  Ralstonia pickettii 12D  Bacteria  normal  0.646384  normal  0.17108 
 
 
-
 
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