28 homologs were found in PanDaTox collection
for query gene Ping_0107 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_0107  type II secretion system protein N  100 
 
 
250 aa  498  1e-140  Psychromonas ingrahamii 37  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_008700  Sama_0179  general secretion pathway protein N  29.96 
 
 
251 aa  133  3e-30  Shewanella amazonensis SB2B  Bacteria  normal  0.107927  normal 
 
 
-
 
NC_009831  Ssed_4348  type II secretion system protein N  30.77 
 
 
252 aa  130  3e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.507417 
 
 
-
 
NC_013456  VEA_001882  general secretion pathway protein N  29.44 
 
 
253 aa  129  4.0000000000000003e-29  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2914  general secretion pathway protein N  29.53 
 
 
253 aa  127  2.0000000000000002e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2296  general secretion pathway protein N  28.11 
 
 
252 aa  126  3e-28  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0131  type II secretion system protein N  29.84 
 
 
253 aa  124  2e-27  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00611  general secretion pathway protein N  28.63 
 
 
253 aa  122  6e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_3609  type II secretion system protein N  29.44 
 
 
253 aa  120  1.9999999999999998e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0161  type II secretion system protein N  27.82 
 
 
253 aa  119  3e-26  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0161  type II secretion system protein N  27.82 
 
 
253 aa  119  3e-26  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0115  type II secretion system protein N  29.63 
 
 
253 aa  119  6e-26  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4724  type II secretion system protein N  29.15 
 
 
252 aa  118  7e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0166  type II secretion system protein N  27.82 
 
 
253 aa  118  7.999999999999999e-26  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0154  type II secretion system protein N  28.15 
 
 
252 aa  117  1.9999999999999998e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0265405  n/a   
 
 
-
 
NC_009665  Shew185_0159  type II secretion system protein N  27.42 
 
 
253 aa  115  6.9999999999999995e-25  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0163  type II secretion system protein N  27.42 
 
 
253 aa  115  7.999999999999999e-25  Shewanella baltica OS195  Bacteria  normal  normal  0.105061 
 
 
-
 
NC_009052  Sbal_4196  type II secretion system protein N  27.02 
 
 
253 aa  114  1.0000000000000001e-24  Shewanella baltica OS155  Bacteria  normal  0.876892  n/a   
 
 
-
 
NC_011663  Sbal223_0164  type II secretion system protein N  27.82 
 
 
253 aa  114  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0176  general secretion pathway protein N  25.81 
 
 
253 aa  112  5e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3557  type II secretion system protein N  25.4 
 
 
253 aa  105  8e-22  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2850  type II secretion system protein N  29.48 
 
 
248 aa  97.4  2e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.936  n/a   
 
 
-
 
NC_008228  Patl_0241  type II secretion system protein N  27.94 
 
 
247 aa  90.5  3e-17  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.335063  n/a   
 
 
-
 
NC_011138  MADE_03966  putative general secretion pathway protein N  28.16 
 
 
254 aa  84.3  0.000000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4581  general secretion pathway protein N  27.45 
 
 
251 aa  79  0.00000000000007  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2383  type II secretion system protein N  25.38 
 
 
262 aa  63.9  0.000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.000000842223 
 
 
-
 
NC_011901  Tgr7_0238  type II secretion system protein N  23.32 
 
 
261 aa  43.9  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3570  hypothetical protein  24.4 
 
 
256 aa  43.5  0.003  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.453301 
 
 
-
 
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