9 homologs were found in PanDaTox collection
for query gene Phep_4087 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_4087  hypothetical protein  100 
 
 
100 aa  203  7e-52  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2591  TonB family protein  52.17 
 
 
275 aa  92.8  1e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0507337  normal  0.083991 
 
 
-
 
NC_009441  Fjoh_0490  TonB family protein  44.62 
 
 
267 aa  63.2  0.000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0223  hypothetical protein  40 
 
 
276 aa  56.6  0.0000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.136098  n/a   
 
 
-
 
NC_013730  Slin_5090  TonB family protein  42.86 
 
 
274 aa  54.3  0.0000006  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.00113498  normal 
 
 
-
 
NC_013037  Dfer_4058  TonB family protein  43.75 
 
 
274 aa  49.3  0.00002  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.00000345217  hitchhiker  0.000000306076 
 
 
-
 
NC_013132  Cpin_1429  TonB family protein  39.68 
 
 
279 aa  48.1  0.00004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.369951  normal 
 
 
-
 
NC_013037  Dfer_5150  TonB family protein  33.93 
 
 
288 aa  44.3  0.0006  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.10123  normal 
 
 
-
 
NC_013132  Cpin_1470  TonB family protein  37.74 
 
 
279 aa  42  0.003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
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