11 homologs were found in PanDaTox collection
for query gene Phep_3115 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_3115    100 
 
 
817 bp  1620    Pedobacter heparinus DSM 2366  Bacteria  unclonable  0.00000237951  normal 
 
 
-
 
NC_013132  Cpin_6811  N-acetylmuramic acid-6-phosphate etherase  89.47 
 
 
801 bp  65.9  0.00000002  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00997485  hitchhiker  0.000351646 
 
 
-
 
CP001509  ECD_02328  N-acetylmuramic acid-6-phosphate etherase  96.88 
 
 
897 bp  56  0.00002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1233  glucokinase regulatory-like protein  96.88 
 
 
897 bp  56  0.00002  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2564  N-acetylmuramic acid-6-phosphate etherase  96.88 
 
 
897 bp  56  0.00002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2714  N-acetylmuramic acid-6-phosphate etherase  96.88 
 
 
897 bp  56  0.00002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1251  N-acetylmuramic acid-6-phosphate etherase  96.88 
 
 
897 bp  56  0.00002  Escherichia coli ATCC 8739  Bacteria  normal  0.674779  normal  0.258404 
 
 
-
 
NC_010498  EcSMS35_2583  N-acetylmuramic acid-6-phosphate etherase  96.88 
 
 
897 bp  56  0.00002  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E2800  N-acetylmuramic acid-6-phosphate etherase  96.88 
 
 
897 bp  56  0.00002  Shigella boydii CDC 3083-94  Bacteria  normal  0.505825  n/a   
 
 
-
 
NC_011353  ECH74115_3658  N-acetylmuramic acid-6-phosphate etherase  96.88 
 
 
897 bp  56  0.00002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02289  hypothetical protein  96.88 
 
 
897 bp  56  0.00002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
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