12 homologs were found in PanDaTox collection
for query gene Phep_1840 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_1840  hypothetical protein  100 
 
 
538 aa  1108    Pedobacter heparinus DSM 2366  Bacteria  normal  0.511064  hitchhiker  0.00000982396 
 
 
-
 
NC_013037  Dfer_2150  hypothetical protein  31.89 
 
 
1043 aa  230  4e-59  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.249829  normal 
 
 
-
 
NC_013061  Phep_2687  hypothetical protein  33.21 
 
 
508 aa  226  6e-58  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00943188 
 
 
-
 
NC_013061  Phep_2787  hypothetical protein  31.5 
 
 
1037 aa  217  4e-55  Pedobacter heparinus DSM 2366  Bacteria  normal  0.595004  normal 
 
 
-
 
NC_009441  Fjoh_4090  hypothetical protein  30.22 
 
 
1061 aa  215  9.999999999999999e-55  Flavobacterium johnsoniae UW101  Bacteria  normal  0.872685  n/a   
 
 
-
 
NC_013947  Snas_2831  hypothetical protein  34.95 
 
 
535 aa  214  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.776559  normal  0.785726 
 
 
-
 
NC_013132  Cpin_1803  hypothetical protein  32.06 
 
 
1030 aa  199  7e-50  Chitinophaga pinensis DSM 2588  Bacteria  unclonable  0.00000714199  normal 
 
 
-
 
NC_009972  Haur_2193  carbohydrate-binding family V/XII protein  31.31 
 
 
790 aa  196  9e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00201516  n/a   
 
 
-
 
NC_010571  Oter_3726  hypothetical protein  29.98 
 
 
997 aa  162  2e-38  Opitutus terrae PB90-1  Bacteria  normal  0.036218  normal 
 
 
-
 
NC_013061  Phep_2692  hypothetical protein  25 
 
 
503 aa  82  0.00000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.996294  decreased coverage  0.00255233 
 
 
-
 
NC_007912  Sde_3862  hypothetical protein  24.38 
 
 
582 aa  63.5  0.000000009  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00590592  normal  0.508788 
 
 
-
 
NC_009441  Fjoh_4192  hypothetical protein  21.95 
 
 
544 aa  54.3  0.000006  Flavobacterium johnsoniae UW101  Bacteria  normal  0.667797  n/a   
 
 
-
 
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