14 homologs were found in PanDaTox collection
for query gene Phep_1115 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013061  Phep_1115  helix-turn-helix domain protein  100 
 
 		 72 aa  146  9e-35  Pedobacter heparinus DSM 2366  Bacteria  normal  1  hitchhiker  0.000000265311 
 
 
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NC_013061  Phep_2266  helix-turn-helix domain protein  38.46 
 
 		 109 aa  55.5  0.0000003  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.0639842 
 
 
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NC_009832  Spro_1454  XRE family transcriptional regulator  32.35 
 
 		 189 aa  42.7  0.001  Serratia proteamaculans 568  Bacteria  normal  0.513852  normal  1 
 
 
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NC_014151  Cfla_3019  transcriptional regulator, XRE family  30.3 
 
 		 198 aa  43.1  0.001  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5338  transcriptional regulator, XRE family  37.1 
 
 		 503 aa  42.7  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.81894 
 
 
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NC_008044  TM1040_2158  XRE family transcriptional regulator  32.81 
 
 		 239 aa  41.2  0.005  Ruegeria sp. TM1040  Bacteria  normal  0.233392  normal  0.181964 
 
 
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NC_005945  BAS0418  prophage LambdaBa04, DNA-binding protein  36.51 
 
 		 113 aa  40.8  0.006  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00527482  n/a   
 
 
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NC_007530  GBAA_0432  prophage LambdaBa04, DNA-binding protein  36.51 
 
 		 113 aa  40.8  0.006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000371645  n/a   
 
 
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NC_013204  Elen_2840  transcriptional regulator, XRE family  37.29 
 
 		 176 aa  40.8  0.007  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
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NC_009953  Sare_3652  XRE family transcriptional regulator  31.34 
 
 		 196 aa  40.4  0.008  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00533728 
 
 
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NC_013061  Phep_1626  helix-turn-helix domain protein  34.38 
 
 		 121 aa  40.4  0.008  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.365666 
 
 
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NC_014210  Ndas_1566  transcriptional regulator, XRE family  30.65 
 
 		 202 aa  40.4  0.008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.0862847 
 
 
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NC_013385  Adeg_1668  transcriptional regulator, XRE family  32.76 
 
 		 256 aa  40.4  0.009  Ammonifex degensii KC4  Bacteria  hitchhiker  0.0000000231765  n/a   
 
 
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NC_013501  Rmar_2248  transcriptional regulator, XRE family  26.87 
 
 		 505 aa  40  0.01  Rhodothermus marinus DSM 4252  Bacteria  normal  0.99928  n/a   
 
 
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