13 homologs were found in PanDaTox collection
for query gene Pfl01_5564 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007492  Pfl01_5564  hypothetical protein  100 
 
 		 330 aa  683    Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.734058 
 
 
-
 
NC_003295  RSc0250  hypothetical protein  35.54 
 
 		 154 aa  87.8  2e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0215907  normal  1 
 
 
-
 
NC_010505  Mrad2831_4273  hypothetical protein  37.6 
 
 		 155 aa  83.6  0.000000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.194674  normal  0.14771 
 
 
-
 
NC_010577  XfasM23_2203  hypothetical protein  31.4 
 
 		 294 aa  77  0.0000000000005  Xylella fastidiosa M23  Bacteria  normal  0.212332  n/a   
 
 
-
 
NC_010513  Xfasm12_2293  hypothetical protein  32.23 
 
 		 297 aa  73.9  0.000000000003  Xylella fastidiosa M12  Bacteria  normal  0.253202  n/a   
 
 
-
 
NC_010577  XfasM23_2195  hypothetical protein  32.23 
 
 		 297 aa  73.2  0.000000000005  Xylella fastidiosa M23  Bacteria  decreased coverage  0.00138486  n/a   
 
 
-
 
NC_010577  XfasM23_2196  hypothetical protein  34.19 
 
 		 154 aa  72  0.00000000001  Xylella fastidiosa M23  Bacteria  normal  0.0130403  n/a   
 
 
-
 
NC_010577  XfasM23_2194  hypothetical protein  34.23 
 
 		 293 aa  65.5  0.000000001  Xylella fastidiosa M23  Bacteria  hitchhiker  0.00160485  n/a   
 
 
-
 
NC_010513  Xfasm12_2292  hypothetical protein  34.23 
 
 		 293 aa  63.9  0.000000004  Xylella fastidiosa M12  Bacteria  normal  0.228835  n/a   
 
 
-
 
NC_010577  XfasM23_2202  hypothetical protein  30.63 
 
 		 292 aa  53.1  0.000006  Xylella fastidiosa M23  Bacteria  normal  0.314288  n/a   
 
 
-
 
NC_010513  Xfasm12_2294  hypothetical protein  30.11 
 
 		 124 aa  50.1  0.00005  Xylella fastidiosa M12  Bacteria  normal  0.120125  n/a   
 
 
-
 
NC_011071  Smal_3804  hypothetical protein  27.12 
 
 		 170 aa  49.7  0.00007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.139809  normal  1 
 
 
-
 
NC_004578  PSPTO_5414  lipoprotein, putative  25.86 
 
 		 338 aa  44.7  0.002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
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