More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_1724 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_1724  methylthioribulose-1-phosphate dehydratase  100 
 
 
208 aa  432  1e-120  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1855  methylthioribulose-1-phosphate dehydratase  85.78 
 
 
204 aa  370  1e-102  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.123422  normal  0.880882 
 
 
-
 
NC_004578  PSPTO_2045  class II aldolase/adducin domain protein  85.29 
 
 
204 aa  369  1e-101  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0362341  n/a   
 
 
-
 
NC_012560  Avin_23780  methylthioribulose-1-phosphate dehydratase  79.61 
 
 
206 aa  353  7.999999999999999e-97  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3589  methylthioribulose-1-phosphate dehydratase  81.77 
 
 
205 aa  352  2.9999999999999997e-96  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_42740  methylthioribulose-1-phosphate dehydratase  81.77 
 
 
205 aa  350  8e-96  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0907  class II aldolase/adducin family protein  63.27 
 
 
208 aa  256  2e-67  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2623  methylthioribulose-1-phosphate dehydratase  52.82 
 
 
207 aa  225  4e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0799  methylthioribulose-1-phosphate dehydratase  51.52 
 
 
227 aa  209  2e-53  Methylococcus capsulatus str. Bath  Bacteria  normal  0.540069  n/a   
 
 
-
 
NC_011071  Smal_1782  methylthioribulose-1-phosphate dehydratase  52.53 
 
 
213 aa  196  2.0000000000000003e-49  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.249759 
 
 
-
 
NC_012917  PC1_3303  methylthioribulose-1-phosphate dehydratase  48.24 
 
 
205 aa  193  1e-48  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1415  methylthioribulose-1-phosphate dehydratase  49.48 
 
 
208 aa  193  2e-48  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0918  methylthioribulose-1-phosphate dehydratase  50.52 
 
 
205 aa  191  6e-48  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1143  methylthioribulose-1-phosphate dehydratase  46.63 
 
 
204 aa  191  7e-48  Enterobacter sp. 638  Bacteria  normal  normal  0.763715 
 
 
-
 
NC_009832  Spro_0942  methylthioribulose-1-phosphate dehydratase  49.75 
 
 
206 aa  190  1e-47  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3457  methylthioribulose-1-phosphate dehydratase  47.74 
 
 
205 aa  190  2e-47  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3182  methylthioribulose-1-phosphate dehydratase  46.73 
 
 
222 aa  187  1e-46  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3331  methylthioribulose-1-phosphate dehydratase  46.73 
 
 
222 aa  187  1e-46  Yersinia pestis Angola  Bacteria  normal  normal  0.903838 
 
 
-
 
NC_012912  Dd1591_0885  methylthioribulose-1-phosphate dehydratase  49.47 
 
 
204 aa  187  1e-46  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3321  methylthioribulose-1-phosphate dehydratase  46.73 
 
 
222 aa  186  2e-46  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00848  methylthioribulose-1-phosphate dehydratase  50.78 
 
 
208 aa  183  2.0000000000000003e-45  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.000215096  n/a   
 
 
-
 
NC_010717  PXO_06079  methylthioribulose-1-phosphate dehydratase  50.78 
 
 
208 aa  183  2.0000000000000003e-45  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.039804  n/a   
 
 
-
 
NC_011126  HY04AAS1_1514  methylthioribulose-1-phosphate dehydratase  42.56 
 
 
203 aa  182  3e-45  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.430865  n/a   
 
 
-
 
NC_010577  XfasM23_1343  methylthioribulose-1-phosphate dehydratase  53.11 
 
 
218 aa  179  2.9999999999999997e-44  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1410  methylthioribulose-1-phosphate dehydratase  53.11 
 
 
218 aa  178  4.999999999999999e-44  Xylella fastidiosa M12  Bacteria  normal  0.238632  n/a   
 
 
-
 
NC_009484  Acry_0017  methylthioribulose-1-phosphate dehydratase  43.52 
 
 
213 aa  163  2.0000000000000002e-39  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1788  methylthioribulose-1-phosphate dehydratase  41.94 
 
 
206 aa  159  2e-38  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00210025  normal  0.0224188 
 
 
-
 
NC_009719  Plav_1852  class II aldolase/adducin family protein  42.71 
 
 
207 aa  159  2e-38  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.604682  normal  0.0869346 
 
 
-
 
NC_009485  BBta_2510  methylthioribulose-1-phosphate dehydratase  44.39 
 
 
216 aa  142  4e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.490663  normal 
 
 
-
 
NC_007604  Synpcc7942_1993  methylthioribulose-1-phosphate dehydratase  40.74 
 
 
206 aa  132  5e-30  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.5622 
 
 
-
 
NC_007513  Syncc9902_1845  putative sugar aldolase  38.34 
 
 
206 aa  129  3e-29  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0490  methylthioribulose-1-phosphate dehydratase  37.31 
 
 
195 aa  127  1.0000000000000001e-28  Synechococcus sp. CC9605  Bacteria  normal  0.290986  normal  0.370435 
 
 
-
 
NC_010730  SYO3AOP1_1268  methylthioribulose-1-phosphate dehydratase  37.02 
 
 
215 aa  113  2.0000000000000002e-24  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1747  methylthioribulose-1-phosphate dehydratase  38.66 
 
 
210 aa  112  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008820  P9303_21771  putative sugar aldolase  33.68 
 
 
207 aa  111  8.000000000000001e-24  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0878998 
 
 
-
 
NC_009674  Bcer98_2737  methylthioribulose-1-phosphate dehydratase  35.64 
 
 
212 aa  111  8.000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0029503  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3867  methylthioribulose-1-phosphate dehydratase  35.29 
 
 
212 aa  109  3e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0098  methylthioribulose-1-phosphate dehydratase  38.54 
 
 
211 aa  108  4.0000000000000004e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.241921  n/a   
 
 
-
 
NC_011658  BCAH187_A4169  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  107  1e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000628786  n/a   
 
 
-
 
NC_011729  PCC7424_0307  methylthioribulose-1-phosphate dehydratase  33.86 
 
 
205 aa  106  3e-22  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.284092 
 
 
-
 
NC_011725  BCB4264_A4147  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  3e-22  Bacillus cereus B4264  Bacteria  normal  0.0451904  n/a   
 
 
-
 
NC_003909  BCE_4105  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  4e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3948  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  4e-22  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3780  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  4e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.79505  n/a   
 
 
-
 
NC_007530  GBAA_4257  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  4e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1091  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  4e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4059  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  4e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK3795  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  105  5e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0852  methylthioribulose-1-phosphate dehydratase  36.76 
 
 
213 aa  101  6e-21  Geobacillus sp. WCH70  Bacteria  normal  0.269604  n/a   
 
 
-
 
NC_011726  PCC8801_1578  methylthioribulose-1-phosphate dehydratase  30.96 
 
 
204 aa  100  1e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1603  methylthioribulose-1-phosphate dehydratase  30.96 
 
 
204 aa  100  1e-20  Cyanothece sp. PCC 8802  Bacteria  normal  0.648125  normal 
 
 
-
 
NC_011206  Lferr_0598  methylthioribulose-1-phosphate dehydratase  29.38 
 
 
206 aa  97.1  2e-19  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.635649  normal 
 
 
-
 
NC_011761  AFE_0436  aldolase, class II  29.38 
 
 
206 aa  97.1  2e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4248  methylthioribulose-1-phosphate dehydratase  32.47 
 
 
226 aa  95.5  5e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.144051  normal 
 
 
-
 
NC_011697  PHATRDRAFT_31147  predicted protein  28.93 
 
 
559 aa  94.4  1e-18  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0700452  n/a   
 
 
-
 
NC_007644  Moth_0704  class II aldolase/adducin-like  29.8 
 
 
207 aa  80.9  0.00000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  hitchhiker  0.0019609 
 
 
-
 
NC_011898  Ccel_1290  class II aldolase/adducin family protein  26.42 
 
 
265 aa  78.2  0.00000000000009  Clostridium cellulolyticum H10  Bacteria  normal  0.984063  n/a   
 
 
-
 
NC_008312  Tery_4305  class II aldolase/adducin-like  28.71 
 
 
252 aa  75.5  0.0000000000005  Trichodesmium erythraeum IMS101  Bacteria  hitchhiker  0.00261955  normal  0.128677 
 
 
-
 
NC_013093  Amir_0986  methylthioribulose-1-phosphate dehydratase  33.33 
 
 
206 aa  75.1  0.0000000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2109  class II aldolase/adducin family protein  29.65 
 
 
212 aa  73.9  0.000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2551  putative aldolase  29.02 
 
 
210 aa  74.7  0.000000000001  Marinomonas sp. MWYL1  Bacteria  normal  0.189319  hitchhiker  0.00972731 
 
 
-
 
NC_009972  Haur_4769  class II aldolase/adducin family protein  39.78 
 
 
227 aa  72  0.000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0014  putative aldolase  28.72 
 
 
210 aa  70.9  0.00000000001  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0398  class II aldolase/adducin family protein  24.53 
 
 
214 aa  70.9  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_0711  class II aldolase/adducin family protein  35.71 
 
 
222 aa  70.5  0.00000000002  Caldivirga maquilingensis IC-167  Archaea  hitchhiker  0.00125122  unclonable  2.5701e-17 
 
 
-
 
NC_006693  CNH02290  cytoplasm protein, putative  28.7 
 
 
244 aa  70.1  0.00000000002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_011831  Cagg_3402  class II aldolase/adducin family protein  30.65 
 
 
225 aa  70.5  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.852747  normal 
 
 
-
 
NC_007644  Moth_2271  class II aldolase/adducin-like  38.78 
 
 
197 aa  69.7  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.453989  hitchhiker  0.000307852 
 
 
-
 
NC_009012  Cthe_0319  class II aldolase/adducin-like protein  28.87 
 
 
214 aa  69.7  0.00000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.294023  n/a   
 
 
-
 
NC_014148  Plim_1747  class II aldolase/adducin family protein  31.73 
 
 
303 aa  69.7  0.00000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.241807  n/a   
 
 
-
 
NC_013757  Gobs_2023  class II aldolase/adducin family protein  37.84 
 
 
208 aa  69.3  0.00000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0841682  n/a   
 
 
-
 
NC_013757  Gobs_1445  class II aldolase/adducin family protein  37.84 
 
 
208 aa  69.3  0.00000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2580  class II aldolase/adducin family protein  29.74 
 
 
216 aa  68.9  0.00000000005  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000000288741  n/a   
 
 
-
 
NC_013517  Sterm_0035  L-ribulose-5-phosphate 4-epimerase  28.57 
 
 
214 aa  67.8  0.0000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5062  class II aldolase/adducin domain protein  37.37 
 
 
212 aa  67.8  0.0000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.754976  n/a   
 
 
-
 
NC_010001  Cphy_1177  class II aldolase/adducin family protein  32.04 
 
 
264 aa  67  0.0000000002  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000951199  n/a   
 
 
-
 
NC_007005  Psyr_0464  putative aldolase  36.36 
 
 
212 aa  66.6  0.0000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4213  class II aldolase/adducin family protein  29.15 
 
 
235 aa  65.9  0.0000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.511631  n/a   
 
 
-
 
NC_010525  Tneu_1346  class II aldolase/adducin family protein  29.71 
 
 
189 aa  65.5  0.0000000005  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0532237  normal 
 
 
-
 
NC_011313  VSAL_II0210  putative aldolase  32.76 
 
 
210 aa  64.7  0.0000000009  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
BN001302  ANIA_03593  class II aldolase/adducin domain protein (AFU_orthologue; AFUA_4G12840)  25.71 
 
 
240 aa  64.3  0.000000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.931983 
 
 
-
 
NC_008148  Rxyl_1678  class II aldolase/adducin-like protein  29.56 
 
 
215 aa  64.3  0.000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.672374  n/a   
 
 
-
 
NC_009784  VIBHAR_04752  putative aldolase  32.73 
 
 
215 aa  64.7  0.000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_4065  class II aldolase/adducin-like  29.08 
 
 
235 aa  63.2  0.000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_0929  class II aldolase/adducin family protein  36.17 
 
 
239 aa  62.8  0.000000004  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_009664  Krad_2485  class II aldolase/adducin family protein  30.11 
 
 
226 aa  62.8  0.000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4482  class II aldolase/adducin-like  33.33 
 
 
220 aa  62.4  0.000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0177289  normal 
 
 
-
 
NC_011769  DvMF_1965  class II aldolase/adducin family protein  34.17 
 
 
385 aa  62.4  0.000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_09610  class II aldolase/adducin family protein  26.09 
 
 
214 aa  62  0.000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4188  class II aldolase/adducin family protein  28.64 
 
 
235 aa  62  0.000000006  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4427  class II aldolase/adducin family protein  26.56 
 
 
266 aa  61.6  0.000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.113248  normal 
 
 
-
 
NC_013517  Sterm_3550  class II aldolase/adducin family protein  27.05 
 
 
214 aa  61.2  0.00000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2434  putative aldolase  36.28 
 
 
211 aa  60.8  0.00000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1051  L-fuculose phosphate aldolase  24.62 
 
 
234 aa  60.5  0.00000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.698084  n/a   
 
 
-
 
NC_011083  SeHA_C4806  L-ribulose-5-phosphate 4-epimerase  27.27 
 
 
228 aa  60.1  0.00000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.365152  normal 
 
 
-
 
NC_007908  Rfer_3750  L-fuculose-phosphate aldolase  31.05 
 
 
227 aa  59.7  0.00000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2736  L-ribulose-5-phosphate 4-epimerase  27.68 
 
 
228 aa  59.7  0.00000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0642  class II aldolase/adducin family protein  25.89 
 
 
215 aa  59.3  0.00000004  Petrotoga mobilis SJ95  Bacteria  normal  0.606774  n/a   
 
 
-
 
NC_009832  Spro_1490  putative aldolase  29.8 
 
 
210 aa  59.3  0.00000004  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2810  class II aldolase/adducin family protein  28.02 
 
 
332 aa  59.3  0.00000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
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