3 homologs were found in PanDaTox collection
for query gene Pden_4636 on replicon NC_008688
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008688  Pden_4636  carbohydrate-selective porin OprB  100 
 
 
448 aa  914    Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.00387478  normal 
 
 
-
 
NC_007953  Bxe_C0653  carbohydrate-selective porin OprB  35.92 
 
 
434 aa  244  1.9999999999999999e-63  Burkholderia xenovorans LB400  Bacteria  normal  0.600231  normal  0.965177 
 
 
-
 
NC_007492  Pfl01_4366  carbohydrate-selective porin OprB  27.4 
 
 
448 aa  49.7  0.0001  Pseudomonas fluorescens Pf0-1  Bacteria  decreased coverage  0.00370105  normal 
 
 
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