11 homologs were found in PanDaTox collection
for query gene Pden_4498 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008687  Pden_4498  hypothetical protein  100 
 
 
300 aa  618  1e-176  Paracoccus denitrificans PD1222  Bacteria  normal  0.464588  normal 
 
 
-
 
NC_007493  RSP_0009  hypothetical protein  73.59 
 
 
289 aa  434  1e-121  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0954529  n/a   
 
 
-
 
NC_009049  Rsph17029_1639  hypothetical protein  73.94 
 
 
289 aa  436  1e-121  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.513589 
 
 
-
 
NC_009428  Rsph17025_2165  hypothetical protein  73.24 
 
 
289 aa  434  1e-120  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1592  hypothetical protein  63.45 
 
 
290 aa  375  1e-103  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.466935  normal  0.17451 
 
 
-
 
NC_008044  TM1040_1378  hypothetical protein  61.89 
 
 
269 aa  339  2.9999999999999998e-92  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2349  hypothetical protein  54.39 
 
 
301 aa  318  9e-86  Jannaschia sp. CCS1  Bacteria  normal  normal  0.0862108 
 
 
-
 
NC_011901  Tgr7_0496  hypothetical protein  48.58 
 
 
279 aa  258  9e-68  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2460  hypothetical protein  45.04 
 
 
283 aa  243  3.9999999999999997e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2702  hypothetical protein  43.66 
 
 
281 aa  240  2.9999999999999997e-62  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0245  hypothetical protein  46.4 
 
 
283 aa  232  6e-60  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>