7 homologs were found in PanDaTox collection
for query gene Pden_0537 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_0537  peptidoglycan binding domain-containing protein  100 
 
 
412 aa  801    Paracoccus denitrificans PD1222  Bacteria  normal  0.268147  normal 
 
 
-
 
NC_007802  Jann_2734  peptidoglycan binding domain-containing protein  26.95 
 
 
585 aa  102  1e-20  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1855  hypothetical protein  26.47 
 
 
593 aa  102  2e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0504  peptidoglycan binding domain-containing protein  26.76 
 
 
593 aa  100  5e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0641  peptidoglycan binding domain-containing protein  28.34 
 
 
589 aa  99.4  9e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.757288 
 
 
-
 
NC_008044  TM1040_2313  peptidoglycan binding domain-containing protein  25.08 
 
 
596 aa  93.2  8e-18  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2405  hypothetical protein  28.71 
 
 
576 aa  89.7  9e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0566608  normal 
 
 
-
 
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