More than 300 homologs were found in PanDaTox collection
for query gene Pcryo_2288 on replicon NC_007969
Organism: Psychrobacter cryohalolentis K5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007969  Pcryo_2288  response regulator receiver domain-containing protein  100 
 
 
322 aa  659    Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.217152 
 
 
-
 
NC_007204  Psyc_0720  response regulator receiver, fis type  48.52 
 
 
312 aa  301  9e-81  Psychrobacter arcticus 273-4  Bacteria  normal  0.935409  normal 
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  47.04 
 
 
311 aa  293  2e-78  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_009656  PSPA7_2273  putative two-component response regulator  35.22 
 
 
304 aa  199  5e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  0.438912  n/a   
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  33.89 
 
 
303 aa  192  9e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1427  response regulator receiver protein  36.69 
 
 
311 aa  187  1e-46  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2388  response regulator receiver protein  42.15 
 
 
154 aa  101  1e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.319662 
 
 
-
 
NC_007492  Pfl01_4550  response regulator receiver domain-containing protein  36.81 
 
 
451 aa  100  3e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.01769  normal 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  39.67 
 
 
154 aa  99.8  6e-20  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_009457  VC0395_A0606  response regulator  35.96 
 
 
447 aa  97.4  3e-19  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.32 
 
 
994 aa  96.7  5e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal 
 
 
-
 
NC_002947  PP_2942  response regulator  40.34 
 
 
456 aa  95.9  9e-19  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  40 
 
 
438 aa  95.5  1e-18  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  33.88 
 
 
823 aa  94.7  2e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1982  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.67 
 
 
1355 aa  94.4  2e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  39.5 
 
 
456 aa  94.4  2e-18  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_013132  Cpin_1315  response regulator receiver sensor signal transduction histidine kinase  38.33 
 
 
365 aa  93.6  4e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  36.84 
 
 
154 aa  94  4e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  37.59 
 
 
449 aa  92.8  6e-18  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_013061  Phep_1525  ATP-binding region ATPase domain protein  38.32 
 
 
359 aa  92.4  9e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  0.331233  normal  0.636632 
 
 
-
 
NC_006349  BMAA1662  response regulator  30.86 
 
 
475 aa  92  1e-17  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0711  response regulator  30.86 
 
 
518 aa  92  1e-17  Burkholderia pseudomallei 1710b  Bacteria  normal  0.226782  n/a   
 
 
-
 
NC_007517  Gmet_3476  response regulator receiver modulated metal dependent phosphohydrolase  40.5 
 
 
479 aa  92  1e-17  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_1923  response regulator  30.86 
 
 
475 aa  92  1e-17  Burkholderia mallei NCTC 10229  Bacteria  normal  0.537818  n/a   
 
 
-
 
NC_009075  BURPS668_A2314  response regulator  30.86 
 
 
475 aa  92  1e-17  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1716  response regulator  30.86 
 
 
475 aa  92  1e-17  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0599  response regulator  30.86 
 
 
475 aa  92  1e-17  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03496  response regulator  38.6 
 
 
434 aa  92  1e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  32.14 
 
 
473 aa  90.9  3e-17  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  33.57 
 
 
470 aa  90.5  3e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  34.21 
 
 
806 aa  90.9  3e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  32.62 
 
 
472 aa  90.5  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  32.62 
 
 
472 aa  90.5  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_009078  BURPS1106A_A2231  response regulator  30.29 
 
 
475 aa  90.5  4e-17  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2689  response regulator  37.29 
 
 
481 aa  88.6  1e-16  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0050  two component, sigma54 specific, transcriptional regulator, Fis family  34.82 
 
 
515 aa  88.6  1e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0532507 
 
 
-
 
NC_007434  BURPS1710b_0923  response regulator  37.29 
 
 
481 aa  88.6  1e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0615  response regulator  36.44 
 
 
484 aa  88.6  1e-16  Burkholderia thailandensis E264  Bacteria  normal  0.177724  n/a   
 
 
-
 
NC_011071  Smal_1912  cyclic nucleotide-binding protein  40 
 
 
590 aa  88.6  1e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0713503  normal  0.243299 
 
 
-
 
NC_008836  BMA10229_A2388  response regulator  37.29 
 
 
481 aa  88.6  1e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2469  response regulator  37.29 
 
 
481 aa  88.6  1e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  0.129941  n/a   
 
 
-
 
NC_009076  BURPS1106A_0757  response regulator/HD domain-containing protein  37.29 
 
 
481 aa  88.6  1e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_01019  Putative signal protein with GGDEF, EAL and two component receiver domains  39.13 
 
 
549 aa  87.8  2e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.159296  n/a   
 
 
-
 
NC_010717  PXO_06147  Putative signal protein with GGDEF, EAL and two component receiver domains  39.13 
 
 
549 aa  87.8  2e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.0015374  n/a   
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  35.59 
 
 
484 aa  88.2  2e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1529  response regulator receiver  33.05 
 
 
151 aa  87.4  3e-16  Pedobacter heparinus DSM 2366  Bacteria  normal  0.542106  normal 
 
 
-
 
NC_009074  BURPS668_0745  response regulator/HD domain-containing protein  37.29 
 
 
481 aa  87.4  3e-16  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2447  signal transduction protein  35.48 
 
 
965 aa  86.7  5e-16  Methylibium petroleiphilum PM1  Bacteria  normal  0.936876  normal 
 
 
-
 
NC_006348  BMA0261  response regulator  37.72 
 
 
439 aa  86.7  6e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2716  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  36.04 
 
 
629 aa  86.3  6e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  34.86 
 
 
492 aa  86.3  7e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.224656 
 
 
-
 
NC_010557  BamMC406_5980  response regulator receiver modulated metal dependent phosphohydrolase  36.84 
 
 
469 aa  86.3  7e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3805  response regulator receiver domain-containing protein  38.46 
 
 
439 aa  86.3  7e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6276  response regulator receiver modulated metal dependent phosphohydrolase  36.84 
 
 
469 aa  86.3  7e-16  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  32.5 
 
 
491 aa  85.9  8e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  32.5 
 
 
491 aa  85.9  8e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2496  two component, sigma54 specific, Fis family transcriptional regulator  25.35 
 
 
495 aa  85.9  9e-16  Magnetococcus sp. MC-1  Bacteria  normal  0.0534594  normal  0.148721 
 
 
-
 
NC_007517  Gmet_3477  PAS/PAC sensor hybrid histidine kinase  34.33 
 
 
1465 aa  85.5  0.000000000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4027  response regulator receiver modulated metal dependent phosphohydrolase  34.17 
 
 
346 aa  85.5  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000247639  n/a   
 
 
-
 
NC_007650  BTH_II0731  response regulator  29.61 
 
 
476 aa  85.1  0.000000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2541  response regulator  36.28 
 
 
441 aa  84  0.000000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  35.59 
 
 
270 aa  84  0.000000000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0430  response regulator receiver protein  36.97 
 
 
423 aa  84  0.000000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal 
 
 
-
 
NC_010814  Glov_1568  response regulator receiver protein  34.68 
 
 
262 aa  83.6  0.000000000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  37.82 
 
 
553 aa  83.6  0.000000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3375  response regulator receiver modulated metal dependent phosphohydrolase  35.78 
 
 
324 aa  83.6  0.000000000000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_5144  response regulator receiver protein  34.51 
 
 
150 aa  83.2  0.000000000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.495356  normal 
 
 
-
 
NC_002939  GSU2094  response regulator  32.85 
 
 
329 aa  82.8  0.000000000000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3241  response regulator  29.05 
 
 
428 aa  82.8  0.000000000000007  Colwellia psychrerythraea 34H  Bacteria  normal  0.0406645  n/a   
 
 
-
 
NC_012880  Dd703_2727  response regulator receiver protein  36.44 
 
 
380 aa  82.8  0.000000000000007  Dickeya dadantii Ech703  Bacteria  normal  0.700678  n/a   
 
 
-
 
NC_011146  Gbem_0639  response regulator receiver modulated metal dependent phosphohydrolase  35.45 
 
 
345 aa  82.8  0.000000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2367  response regulator receiver modulated metal dependent phosphohydrolase  39.09 
 
 
538 aa  82.4  0.000000000000009  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_0966  type II secretion system protein E  34.45 
 
 
746 aa  82  0.00000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.783688 
 
 
-
 
NC_013037  Dfer_2524  response regulator receiver protein  35.34 
 
 
137 aa  81.6  0.00000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  33.61 
 
 
495 aa  81.6  0.00000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2392  response regulator receiver sensor signal transduction histidine kinase  36.63 
 
 
363 aa  81.6  0.00000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1179  sigma-54 factor, interaction region  36.28 
 
 
482 aa  81.6  0.00000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0557788  normal 
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  33.77 
 
 
439 aa  81.3  0.00000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  36.75 
 
 
486 aa  80.5  0.00000000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_008346  Swol_2547  response regulator receiver protein  32.48 
 
 
395 aa  80.9  0.00000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2371  response regulator receiver protein  32.14 
 
 
382 aa  80.5  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0784161  n/a   
 
 
-
 
NC_011146  Gbem_0885  response regulator receiver modulated metal dependent phosphohydrolase  33.94 
 
 
324 aa  80.9  0.00000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2723  putative PAS/PAC sensor protein  29.94 
 
 
285 aa  80.5  0.00000000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0653  response regulator receiver modulated metal dependent phosphohydrolase  35.4 
 
 
345 aa  80.1  0.00000000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.6785900000000002e-24 
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  36.22 
 
 
315 aa  79.7  0.00000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2722  response regulator receiver modulated metal dependent phosphohydrolase  37.61 
 
 
444 aa  79.7  0.00000000000006  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  36.8 
 
 
317 aa  79.7  0.00000000000007  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_009485  BBta_2012  two component, sigma54 specific, Fis family transcriptional regulator  30.09 
 
 
485 aa  79.3  0.00000000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3245  sigma 54-dependent DNA-binding response regulator  36.94 
 
 
488 aa  79  0.0000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.482559  n/a   
 
 
-
 
NC_009720  Xaut_2184  two component, sigma54 specific, Fis family transcriptional regulator  33.64 
 
 
497 aa  78.6  0.0000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.682977  normal  0.229753 
 
 
-
 
NC_010814  Glov_1564  response regulator receiver sensor signal transduction histidine kinase  33.91 
 
 
395 aa  78.6  0.0000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3109  two component, sigma54 specific, Fis family transcriptional regulator  31.09 
 
 
493 aa  79  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2721  response regulator receiver protein  32.14 
 
 
188 aa  79  0.0000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  35.96 
 
 
557 aa  78.6  0.0000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1161  two component, sigma54 specific, Fis family transcriptional regulator  32.2 
 
 
496 aa  78.2  0.0000000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.175427  normal 
 
 
-
 
NC_011004  Rpal_1171  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
482 aa  78.2  0.0000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1542  response regulator receiver domain-containing protein  31.36 
 
 
309 aa  78.2  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000150385  normal  0.319028 
 
 
-
 
NC_008228  Patl_1538  response regulator receiver modulated diguanylate phosphodiesterase  33.05 
 
 
563 aa  78.2  0.0000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  35 
 
 
1156 aa  77.4  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  32.26 
 
 
452 aa  77.4  0.0000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
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