15 homologs were found in PanDaTox collection
for query gene Patl_3540 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_3540  hypothetical protein  100 
 
 
478 aa  976    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1852  glycoside hydrolase family protein  33.61 
 
 
638 aa  68.2  0.0000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0830  sialic acid-specific 9-O-acetylesterase  21.33 
 
 
635 aa  58.2  0.0000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.174832  n/a   
 
 
-
 
NC_013730  Slin_1717  protein of unknown function DUF303 acetylesterase putative  22.29 
 
 
642 aa  58.2  0.0000004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2722  protein of unknown function DUF303 acetylesterase putative  35.29 
 
 
628 aa  53.9  0.000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1628  protein of unknown function DUF303 acetylesterase putative  33.71 
 
 
678 aa  50.4  0.00007  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3021  protein of unknown function DUF303 acetylesterase putative  35.56 
 
 
501 aa  50.1  0.00009  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.000125756  normal  0.885504 
 
 
-
 
NC_008009  Acid345_1697  sialate O-acetylesterase  35.23 
 
 
503 aa  49.7  0.0001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.240139  normal  0.0645618 
 
 
-
 
NC_013132  Cpin_1583  Sialate O-acetylesterase  29.35 
 
 
486 aa  49.7  0.0001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.128586 
 
 
-
 
NC_013162  Coch_1034  Sialate O-acetylesterase  33.71 
 
 
689 aa  48.1  0.0003  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1262  protein of unknown function DUF303 acetylesterase putative  23.27 
 
 
635 aa  47.8  0.0004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4847  protein of unknown function DUF303 acetylesterase putative  30.59 
 
 
637 aa  45.4  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.277703  hitchhiker  0.00343122 
 
 
-
 
NC_009441  Fjoh_4100  sialate O-acetylesterase  26.12 
 
 
474 aa  45.1  0.003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0773  protein of unknown function DUF303, acetylesterase putative  26.51 
 
 
648 aa  44.3  0.004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2210  Sialate O-acetylesterase  30.11 
 
 
466 aa  43.5  0.009  Pedobacter heparinus DSM 2366  Bacteria  normal  0.32552  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>