More than 300 homologs were found in PanDaTox collection
for query gene Patl_2214 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
CP001509  ECD_00037  carbamoyl-phosphate synthase large subunit  77.33 
 
 		 1073 aa  1733    Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_3566  carbamoyl-phosphate synthase, large subunit  77.24 
 
 		 1073 aa  1731    Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1276  carbamoyl-phosphate synthase, large subunit  63.13 
 
 		 1081 aa  1395    Geobacter sulfurreducens PCA  Bacteria  normal  0.104945  n/a   
 
 
-
 
NC_002947  PP_4723  carbamoyl phosphate synthase large subunit  73.95 
 
 		 1073 aa  1640    Pseudomonas putida KT2440  Bacteria  normal  1  hitchhiker  0.00575089 
 
 
-
 
NC_002977  MCA1852  carbamoyl-phosphate synthase, large subunit  69.65 
 
 		 1072 aa  1558    Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD1295  carbamoyl phosphate synthase large subunit  52.63 
 
 		 1151 aa  1146    Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc1521  carbamoyl phosphate synthase large subunit  67.59 
 
 		 1081 aa  1469    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_3931  carbamoyl phosphate synthase large subunit  50.05 
 
 		 1072 aa  1051    Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3458  carbamoyl phosphate synthase large subunit  76.94 
 
 		 1071 aa  1735    Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_003912  CJE0327  carbamoyl phosphate synthase large subunit  53.14 
 
 		 1089 aa  1163    Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR1488  carbamoyl phosphate synthase large subunit  59.26 
 
 		 1162 aa  1307    Brucella suis 1330  Bacteria  normal  0.284371  n/a   
 
 
-
 
NC_004347  SO_1142  carbamoyl phosphate synthase large subunit  78.26 
 
 		 1074 aa  1751    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4501  carbamoyl-phosphate synthase, large subunit  74.79 
 
 		 1073 aa  1654    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS3737  carbamoyl phosphate synthase large subunit  49.95 
 
 		 1072 aa  1047    Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_3628  carbamoyl phosphate synthase large subunit  49.95 
 
 		 1072 aa  1049    Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK3645  carbamoyl phosphate synthase large subunit  49.95 
 
 		 1072 aa  1048    Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA0772  carbamoyl phosphate synthase large subunit  68.75 
 
 		 1084 aa  1461    Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp2678  carbamoyl-phosphate synthase large subunit  67.1 
 
 		 1067 aa  1472    Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2550  carbamoyl-phosphate synthase large subunit  67.2 
 
 		 1067 aa  1472    Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4191  carbamoyl phosphate synthase large subunit  74.51 
 
 		 1073 aa  1649    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.725714  normal  1 
 
 
-
 
NC_007204  Psyc_0814  carbamoyl-phosphate synthase large subunit  70.62 
 
 		 1084 aa  1578    Psychrobacter arcticus 273-4  Bacteria  normal  0.253705  normal  0.0427985 
 
 
-
 
NC_007298  Daro_0939  carbamoyl phosphate synthase large subunit  69.4 
 
 		 1068 aa  1517    Dechloromonas aromatica RCB  Bacteria  normal  0.245842  normal  1 
 
 
-
 
NC_007333  Tfu_1057  carbamoyl-phosphate synthase large subunit  54.4 
 
 		 1103 aa  1166    Thermobifida fusca YX  Bacteria  normal  0.614826  n/a   
 
 
-
 
NC_007335  PMN2A_0226  carbamoyl phosphate synthase large subunit  54.43 
 
 		 1102 aa  1180    Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A2175  carbamoyl phosphate synthase large subunit  68.42 
 
 		 1082 aa  1492    Ralstonia eutropha JMP134  Bacteria  normal  0.321083  n/a   
 
 
-
 
NC_007354  Ecaj_0635  carbamoyl phosphate synthase large subunit  54.34 
 
 		 1076 aa  1172    Ehrlichia canis str. Jake  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A2374  carbamoyl phosphate synthase large subunit  49.91 
 
 		 1071 aa  1072    Methanosarcina barkeri str. Fusaro  Archaea  normal  0.128175  normal  0.572238 
 
 
-
 
NC_007404  Tbd_1128  carbamoyl-phosphate synthase large subunit  69.68 
 
 		 1068 aa  1537    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_2449  carbamoyl phosphate synthase large subunit  58.79 
 
 		 1154 aa  1292    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.060664  normal  0.634993 
 
 
-
 
NC_007413  Ava_1893  carbamoyl phosphate synthase large subunit  57.76 
 
 		 1097 aa  1240    Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.457655 
 
 
-
 
NC_007434  BURPS1710b_1610  carbamoyl phosphate synthase large subunit  68.75 
 
 		 1084 aa  1461    Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_2572  carbamoyl-phosphate synthase, large subunit, glutamine-dependent  69.6 
 
 		 1073 aa  1549    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0164695  n/a   
 
 
-
 
NC_007492  Pfl01_0767  carbamoyl phosphate synthase large subunit  74.32 
 
 		 1073 aa  1647    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.256868  normal  0.1584 
 
 
-
 
NC_007493  RSP_0818  carbamoyl phosphate synthase large subunit  61.36 
 
 		 1113 aa  1280    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.459239  n/a   
 
 
-
 
NC_007498  Pcar_1612  carbamoyl-phosphate synthase large subunit  62.63 
 
 		 1084 aa  1351    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000225246  n/a   
 
 
-
 
NC_007510  Bcep18194_A4434  carbamoyl phosphate synthase large subunit  68.66 
 
 		 1084 aa  1472    Burkholderia sp. 383  Bacteria  normal  0.901891  normal  1 
 
 
-
 
NC_007513  Syncc9902_0836  carbamoyl phosphate synthase large subunit  55.47 
 
 		 1106 aa  1194    Synechococcus sp. CC9902  Bacteria  normal  1  n/a   
 
 
-
 
NC_007516  Syncc9605_1819  carbamoyl phosphate synthase large subunit  55.19 
 
 		 1107 aa  1201    Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_0661  carbamoyl phosphate synthase large subunit  51.03 
 
 		 1066 aa  1050    Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00149325  normal  0.138255 
 
 
-
 
NC_007517  Gmet_1774  carbamoyl-phosphate synthase large subunit  62.51 
 
 		 1081 aa  1390    Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000157385  normal  0.0854041 
 
 
-
 
NC_007519  Dde_0333  carbamoyl-phosphate synthase large subunit  57.01 
 
 		 1087 aa  1245    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.639877  n/a   
 
 
-
 
NC_007520  Tcr_0879  carbamoyl-phosphate synthase, large subunit  70.41 
 
 		 1070 aa  1555    Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4025  carbamoyl phosphate synthase large subunit  49.95 
 
 		 1072 aa  1047    Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007575  Suden_1467  carbamoyl phosphate synthase large subunit  56.63 
 
 		 1085 aa  1211    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_007577  PMT9312_0975  carbamoyl-phosphate synthase large subunit  55.17 
 
 		 1098 aa  1174    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_0711  carbamoyl phosphate synthase large subunit  57.32 
 
 		 1097 aa  1236    Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A0479  carbamoyl-phosphate synthase, large subunit  69.5 
 
 		 1075 aa  1486    Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2886  carbamoyl phosphate synthase large subunit  62.14 
 
 		 1082 aa  1346    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.827795  n/a   
 
 
-
 
NC_007651  BTH_I2781  carbamoyl phosphate synthase large subunit  68.66 
 
 		 1084 aa  1465    Burkholderia thailandensis E264  Bacteria  normal  0.0855395  n/a   
 
 
-
 
NC_007760  Adeh_1729  carbamoyl phosphate synthase large subunit  60.5 
 
 		 1077 aa  1340    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3198  carbamoyl phosphate synthase large subunit  51.19 
 
 		 1130 aa  1078    Frankia sp. CcI3  Bacteria  decreased coverage  0.00397433  normal  1 
 
 
-
 
NC_007778  RPB_1516  carbamoyl phosphate synthase large subunit  61.67 
 
 		 1109 aa  1319    Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_2230  carbamoyl phosphate synthase large subunit  60.48 
 
 		 1107 aa  1289    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.497608  n/a   
 
 
-
 
NC_007798  NSE_0222  carbamoyl-phosphate synthase, large subunit  52.02 
 
 		 1073 aa  1052    Neorickettsia sennetsu str. Miyayama  Bacteria  normal  0.256001  n/a   
 
 
-
 
NC_007799  ECH_0378  carbamoyl phosphate synthase large subunit  54.48 
 
 		 1076 aa  1175    Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.546328  n/a   
 
 
-
 
NC_007802  Jann_1063  carbamoyl phosphate synthase large subunit  60.9 
 
 		 1110 aa  1313    Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_2006  carbamoyl-phosphate synthase, large subunit  66.64 
 
 		 1098 aa  1464    Rhodoferax ferrireducens T118  Bacteria  normal  0.488825  n/a   
 
 
-
 
NC_007912  Sde_2728  carbamoyl phosphate synthase large subunit  71.5 
 
 		 1077 aa  1589    Saccharophagus degradans 2-40  Bacteria  normal  0.523784  normal  1 
 
 
-
 
NC_007925  RPC_3835  carbamoyl phosphate synthase large subunit  59.39 
 
 		 1154 aa  1308    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.863015  normal  0.842487 
 
 
-
 
NC_007947  Mfla_0779  carbamoyl-phosphate synthase large subunit  70.03 
 
 		 1068 aa  1571    Methylobacillus flagellatus KT  Bacteria  normal  0.0332696  hitchhiker  0.000231672 
 
 
-
 
NC_007948  Bpro_2678  carbamoyl-phosphate synthase large subunit  68.52 
 
 		 1076 aa  1484    Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A1257  carbamoyl phosphate synthase large subunit  68.2 
 
 		 1084 aa  1467    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_0996  carbamoyl phosphate synthase large subunit  77.99 
 
 		 1075 aa  1753    Shewanella denitrificans OS217  Bacteria  normal  0.846706  n/a   
 
 
-
 
NC_007955  Mbur_0872  carbamoyl phosphate synthase large subunit  51.43 
 
 		 1075 aa  1109    Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_007958  RPD_1457  carbamoyl phosphate synthase large subunit  61.67 
 
 		 1109 aa  1318    Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_3085  carbamoyl-phosphate synthase large subunit  73.02 
 
 		 1076 aa  1614    Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_2875  carbamoyl phosphate synthase large subunit  58.79 
 
 		 1154 aa  1302    Nitrobacter hamburgensis X14  Bacteria  normal  0.712522  n/a   
 
 
-
 
NC_007969  Pcryo_0829  carbamoyl-phosphate synthase, large subunit  70.71 
 
 		 1112 aa  1581    Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_2193  carbamoyl phosphate synthase large subunit  68.32 
 
 		 1082 aa  1484    Cupriavidus metallidurans CH34  Bacteria  normal  0.0442347  normal  0.129534 
 
 
-
 
NC_007984  BCI_0560  carbamoyl-phosphate synthase, large subunit  65.46 
 
 		 1079 aa  1458    Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_2197  carbamoyl-phosphate synthase large subunit  54.82 
 
 		 1102 aa  1200    Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_2070  carbamoyl phosphate synthase large subunit  57.7 
 
 		 1029 aa  1121    Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0632  carbamoyl phosphate synthase large subunit  60.86 
 
 		 1120 aa  1323    Ruegeria sp. TM1040  Bacteria  normal  0.298922  normal  0.175677 
 
 
-
 
NC_008048  Sala_0985  carbamoyl phosphate synthase large subunit  61.85 
 
 		 1106 aa  1318    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.557617  normal  1 
 
 
-
 
NC_008060  Bcen_0811  carbamoyl phosphate synthase large subunit  68.66 
 
 		 1084 aa  1469    Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_2367  carbamoyl phosphate synthase large subunit  51.34 
 
 		 1112 aa  1080    Mycobacterium sp. MCS  Bacteria  normal  0.817973  n/a   
 
 
-
 
NC_008148  Rxyl_1477  carbamoyl-phosphate synthase large subunit  53.22 
 
 		 1054 aa  1126    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.438417  n/a   
 
 
-
 
NC_008228  Patl_2214  carbamoyl phosphate synthase large subunit  100 
 
 		 1072 aa  2195    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.173726  n/a   
 
 
-
 
NC_008254  Meso_2095  carbamoyl phosphate synthase large subunit  58.52 
 
 		 1162 aa  1292    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_2877  carbamoyl phosphate synthase large subunit  57.5 
 
 		 1076 aa  1209    Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.1435 
 
 
-
 
NC_008321  Shewmr4_0966  carbamoyl phosphate synthase large subunit  78.17 
 
 		 1074 aa  1750    Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_1004  carbamoyl phosphate synthase large subunit  78.17 
 
 		 1074 aa  1750    Shewanella sp. MR-7  Bacteria  normal  0.777466  normal  0.846919 
 
 
-
 
NC_008340  Mlg_1981  carbamoyl-phosphate synthase large subunit  71.47 
 
 		 1078 aa  1581    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  decreased coverage  0.00635498 
 
 
-
 
NC_008345  Sfri_0976  carbamoyl phosphate synthase large subunit  78.34 
 
 		 1073 aa  1768    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2138  carbamoyl phosphate synthase large subunit  63.36 
 
 		 1085 aa  1352    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.0923584 
 
 
-
 
NC_008390  Bamb_1169  carbamoyl phosphate synthase large subunit  68.66 
 
 		 1084 aa  1460    Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_62910  carbamoyl phosphate synthase large subunit  74.44 
 
 		 1073 aa  1652    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_2262  carbamoyl phosphate synthase large subunit  53.04 
 
 		 1099 aa  1132    Arthrobacter sp. FB24  Bacteria  normal  0.133094  n/a   
 
 
-
 
NC_008542  Bcen2424_1292  carbamoyl phosphate synthase large subunit  68.66 
 
 		 1084 aa  1469    Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_008553  Mthe_1254  carbamoyl phosphate synthase large subunit  52.33 
 
 		 1074 aa  1095    Methanosaeta thermophila PT  Archaea  normal  0.179154  n/a   
 
 
-
 
NC_008554  Sfum_0008  carbamoyl phosphate synthase large subunit  58.6 
 
 		 1080 aa  1254    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.196188  normal  1 
 
 
-
 
NC_008576  Mmc1_3018  carbamoyl-phosphate synthase large subunit  63.76 
 
 		 1074 aa  1395    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_0968  carbamoyl phosphate synthase large subunit  78.08 
 
 		 1074 aa  1748    Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1298  carbamoyl-phosphate synthase large subunit  54.59 
 
 		 1093 aa  1153    Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.0243124 
 
 
-
 
NC_008599  CFF8240_0319  carbamoyl phosphate synthase large subunit  53.75 
 
 		 1084 aa  1154    Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2524  carbamoyl-phosphate synthase, large subunit  64.25 
 
 		 1078 aa  1417    Pelobacter propionicus DSM 2379  Bacteria  normal  0.0237548  n/a   
 
 
-
 
NC_008686  Pden_1879  carbamoyl phosphate synthase large subunit  62.19 
 
 		 1110 aa  1318    Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.99136 
 
 
-
 
NC_008699  Noca_2431  carbamoyl-phosphate synthase large subunit  51.66 
 
 		 1143 aa  1102    Nocardioides sp. JS614  Bacteria  normal  0.133132  n/a   
 
 
-
 
NC_008700  Sama_2503  carbamoyl phosphate synthase large subunit  78.06 
 
 		 1076 aa  1761    Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_2414  carbamoyl phosphate synthase large subunit  51.34 
 
 		 1112 aa  1080    Mycobacterium sp. KMS  Bacteria  normal  0.271398  normal  0.318582 
 
 
-
 
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