More than 300 homologs were found in PanDaTox collection
for query gene Patl_0572 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_0572  HPr family phosphocarrier protein  100 
 
 
92 aa  182  1.0000000000000001e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03197  phosphocarrier protein NPR  67.05 
 
 
90 aa  117  7e-26  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.789521  n/a   
 
 
-
 
NC_007954  Sden_0485  phosphotransferase system, HPr  60.67 
 
 
91 aa  113  1.0000000000000001e-24  Shewanella denitrificans OS217  Bacteria  normal  0.467636  n/a   
 
 
-
 
NC_009092  Shew_3315  phosphotransferase system, phosphocarrier protein HPr  60.23 
 
 
91 aa  108  3e-23  Shewanella loihica PV-4  Bacteria  normal  0.297486  normal  0.989265 
 
 
-
 
NC_008700  Sama_3092  phosphocarrier protein NPR  62.5 
 
 
91 aa  108  4.0000000000000004e-23  Shewanella amazonensis SB2B  Bacteria  normal  0.429943  normal  0.129077 
 
 
-
 
NC_009997  Sbal195_0712  phosphotransferase system, phosphocarrier protein HPr  57.3 
 
 
91 aa  107  7.000000000000001e-23  Shewanella baltica OS195  Bacteria  normal  0.0372719  normal  0.29399 
 
 
-
 
NC_009052  Sbal_3672  phosphotransferase system, phosphocarrier protein HPr  57.3 
 
 
91 aa  107  7.000000000000001e-23  Shewanella baltica OS155  Bacteria  hitchhiker  0.0025895  n/a   
 
 
-
 
NC_009665  Shew185_0682  phosphotransferase system, phosphocarrier protein HPr  57.3 
 
 
91 aa  107  7.000000000000001e-23  Shewanella baltica OS185  Bacteria  normal  0.520502  n/a   
 
 
-
 
NC_009831  Ssed_0722  phosphocarrier protein NPR  58.43 
 
 
91 aa  106  1e-22  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.118934 
 
 
-
 
NC_009438  Sputcn32_0711  phosphotransferase system, phosphocarrier protein HPr  57.3 
 
 
91 aa  105  2e-22  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000145136  n/a   
 
 
-
 
NC_011663  Sbal223_0703  phosphocarrier, HPr family  56.18 
 
 
91 aa  105  2e-22  Shewanella baltica OS223  Bacteria  normal  normal  0.45808 
 
 
-
 
NC_009901  Spea_3621  phosphotransferase system, phosphocarrier protein HPr  56.98 
 
 
91 aa  102  1e-21  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0126154  n/a   
 
 
-
 
NC_004347  SO_3965  phosphocarrier protein NPR  55.06 
 
 
91 aa  102  2e-21  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0669  HPr family phosphocarrier protein  55.06 
 
 
91 aa  102  2e-21  Shewanella sp. MR-4  Bacteria  normal  0.0255747  normal 
 
 
-
 
NC_008322  Shewmr7_3353  HPr family phosphocarrier protein  55.06 
 
 
91 aa  102  2e-21  Shewanella sp. MR-7  Bacteria  normal  0.056229  normal  0.054295 
 
 
-
 
NC_008577  Shewana3_0668  HPr family phosphocarrier protein  55.06 
 
 
91 aa  102  2e-21  Shewanella sp. ANA-3  Bacteria  normal  0.0597918  normal  0.15009 
 
 
-
 
NC_010506  Swoo_4244  phosphotransferase system, phosphocarrier protein HPr  56.82 
 
 
91 aa  100  5e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0549022  hitchhiker  0.000000216421 
 
 
-
 
NC_008345  Sfri_3381  phosphocarrier, HPr family protein  56.82 
 
 
91 aa  96.3  1e-19  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.497363  n/a   
 
 
-
 
NC_009457  VC0395_A2113  phosphocarrier protein NPr  52.22 
 
 
92 aa  89  2e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002399  phosphocarrier protein nitrogen regulation associated  52.81 
 
 
91 aa  89.4  2e-17  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03668  hypothetical protein  51.69 
 
 
91 aa  88.2  4e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010655  Amuc_1757  Phosphotransferase system, phosphocarrier protein HPr  47.06 
 
 
88 aa  87.4  6e-17  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0494  phosphocarrier protein NPr  49.43 
 
 
92 aa  85.5  2e-16  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.13342  n/a   
 
 
-
 
NC_013889  TK90_0376  Phosphotransferase system, phosphocarrier protein HPr  40 
 
 
89 aa  85.1  3e-16  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.293876 
 
 
-
 
NC_008709  Ping_2895  phosphocarrier protein NPr of HPr family protein  50 
 
 
92 aa  85.1  3e-16  Psychromonas ingrahamii 37  Bacteria  normal  0.723718  normal  0.148271 
 
 
-
 
NC_007958  RPD_0371  phosphotransferase system, HPr  39.56 
 
 
111 aa  83.6  8e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0255941 
 
 
-
 
NC_011004  Rpal_0357  Phosphotransferase system, phosphocarrier protein HPr  38.46 
 
 
110 aa  83.2  0.000000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0444  phosphotransferase system, phosphocarrier protein HPr  47.73 
 
 
99 aa  83.2  0.000000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2833  phosphocarrier protein HPr  44.32 
 
 
89 aa  82.4  0.000000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.858125  n/a   
 
 
-
 
NC_006348  BMA3212  phosphocarrier protein HPr  44.32 
 
 
89 aa  82.4  0.000000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0657  phosphocarrier protein HPr  44.32 
 
 
89 aa  82.4  0.000000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.300797  n/a   
 
 
-
 
NC_009076  BURPS1106A_0492  phosphocarrier protein HPr  44.32 
 
 
89 aa  82.4  0.000000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1406  phosphocarrier protein HPr  44.32 
 
 
89 aa  82.4  0.000000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0186  phosphocarrier protein HPr  44.32 
 
 
89 aa  82.4  0.000000000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0473  phosphocarrier protein HPr  44.32 
 
 
89 aa  82.4  0.000000000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.316514  n/a   
 
 
-
 
NC_010551  BamMC406_2778  phosphotransferase system, phosphocarrier protein HPr  43.18 
 
 
89 aa  81.3  0.000000000000004  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2872  phosphotransferase system, phosphocarrier protein HPr  43.18 
 
 
89 aa  81.3  0.000000000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.424776  normal  0.410297 
 
 
-
 
NC_008060  Bcen_2247  phosphotransferase system, HPr  43.18 
 
 
89 aa  81.3  0.000000000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2916  HPr family phosphocarrier protein  43.18 
 
 
89 aa  81.3  0.000000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2861  HPr family phosphocarrier protein  43.18 
 
 
89 aa  81.3  0.000000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  0.324976  n/a   
 
 
-
 
NC_010338  Caul_4626  phosphotransferase system, phosphocarrier protein HPr  44.44 
 
 
92 aa  80.9  0.000000000000005  Caulobacter sp. K31  Bacteria  normal  0.563542  normal 
 
 
-
 
NC_007778  RPB_0467  HPrNtr  37.08 
 
 
108 aa  80.5  0.000000000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.319274  normal  0.40713 
 
 
-
 
NC_011901  Tgr7_0720  phosphoryl transfer system, HPr  38.64 
 
 
89 aa  80.5  0.000000000000008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1900  Phosphotransferase system, phosphocarrier protein HPr  44.32 
 
 
107 aa  79.7  0.00000000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0610024 
 
 
-
 
NC_007498  Pcar_1930  phosphocarrier protein HPr  44.71 
 
 
95 aa  80.1  0.00000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000294443  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1209  phosphocarrier protein HPr  43.02 
 
 
89 aa  79  0.00000000000002  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0756  phosphocarrier protein HPr  43.02 
 
 
89 aa  79  0.00000000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0353  phosphotransferase system, phosphocarrier protein HPr  42.05 
 
 
89 aa  79.3  0.00000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  decreased coverage  0.000307134 
 
 
-
 
NC_007510  Bcep18194_A6190  HPrNtr  42.05 
 
 
89 aa  78.6  0.00000000000003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0048  phosphocarrier protein HPr  41.86 
 
 
91 aa  78.6  0.00000000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0412  phosphocarrier protein HPr  42.05 
 
 
89 aa  78.2  0.00000000000004  Burkholderia thailandensis E264  Bacteria  normal  0.889761  n/a   
 
 
-
 
NC_010084  Bmul_0442  phosphotransferase system, phosphocarrier protein HPr  42.05 
 
 
89 aa  78.2  0.00000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.293204  normal 
 
 
-
 
NC_011992  Dtpsy_0291  phosphocarrier, HPr family  40.91 
 
 
89 aa  77.8  0.00000000000005  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3182  HNH nuclease  43.9 
 
 
89 aa  77.8  0.00000000000005  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0261  phosphotransferase system, phosphocarrier protein HPr  42.05 
 
 
89 aa  77.4  0.00000000000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0296  phosphoryl transfer system, HPr  39.77 
 
 
89 aa  77.4  0.00000000000006  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0152  HPrNtr  40.7 
 
 
90 aa  77.4  0.00000000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.28673  n/a   
 
 
-
 
NC_011145  AnaeK_0159  phosphotransferase system, phosphocarrier protein HPr  40.7 
 
 
90 aa  77.4  0.00000000000006  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0170  phosphocarrier, HPr family  40.7 
 
 
90 aa  77.4  0.00000000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0296  phosphotransferase system, phosphocarrier protein HPr  40.91 
 
 
89 aa  77.4  0.00000000000006  Acidovorax sp. JS42  Bacteria  normal  hitchhiker  0.000166635 
 
 
-
 
NC_009675  Anae109_0157  phosphotransferase system, phosphocarrier protein HPr  40.45 
 
 
90 aa  77.4  0.00000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.160349 
 
 
-
 
NC_003910  CPS_4547  phosphocarrier protein NPr  46.34 
 
 
91 aa  77  0.00000000000008  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0530  Phosphotransferase system, phosphocarrier protein HPr  40.91 
 
 
89 aa  77  0.00000000000008  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0602783  normal 
 
 
-
 
NC_007951  Bxe_A4185  HPrNtr  40.91 
 
 
89 aa  76.6  0.00000000000009  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2420  phosphotransferase system, phosphocarrier protein HPr  41.38 
 
 
89 aa  76.3  0.0000000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11815 
 
 
-
 
NC_007947  Mfla_0147  HPrNtr  41.46 
 
 
89 aa  75.5  0.0000000000002  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.377653 
 
 
-
 
NC_008554  Sfum_0773  phosphotransferase system, phosphocarrier protein HPr  42.53 
 
 
98 aa  75.5  0.0000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.106388  normal 
 
 
-
 
NC_011662  Tmz1t_0468  Phosphotransferase system, phosphocarrier protein HPr  40.24 
 
 
89 aa  75.5  0.0000000000003  Thauera sp. MZ1T  Bacteria  normal  0.278707  n/a   
 
 
-
 
NC_007973  Rmet_0245  hypothetical protein  38.64 
 
 
89 aa  75.1  0.0000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  0.519653  normal 
 
 
-
 
NC_008044  TM1040_2436  phosphotransferase system, HPr  45.24 
 
 
89 aa  75.5  0.0000000000003  Ruegeria sp. TM1040  Bacteria  normal  0.119206  normal  0.979343 
 
 
-
 
NC_008254  Meso_3575  HPr family phosphocarrier protein  39.77 
 
 
101 aa  74.7  0.0000000000004  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1396  phosphocarrier, HPr family  38.64 
 
 
107 aa  74.3  0.0000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.135473 
 
 
-
 
NC_010172  Mext_1234  HPr family phosphocarrier protein  38.64 
 
 
107 aa  74.3  0.0000000000005  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2799  phosphoryl transfer system, HPr  37.8 
 
 
89 aa  73.9  0.0000000000006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1912  phosphotransferase system, phosphocarrier protein HPr  34.44 
 
 
99 aa  73.9  0.0000000000006  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0238  phosphotransferase system, phosphocarrier protein HPr  41.46 
 
 
89 aa  74.3  0.0000000000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.610305  normal  0.320844 
 
 
-
 
NC_013422  Hneap_0744  Phosphotransferase system, phosphocarrier protein HPr  41.46 
 
 
89 aa  73.9  0.0000000000007  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0408  phosphotransferase system, phosphocarrier protein HPr  40.91 
 
 
89 aa  73.9  0.0000000000007  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4897  Phosphotransferase system, phosphocarrier protein HPr  39.77 
 
 
89 aa  73.6  0.0000000000009  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20160  Phosphotransferase system, phosphocarrier protein HPr  39.53 
 
 
94 aa  73.2  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1288  HPrNtr  41.86 
 
 
88 aa  73.2  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  0.12196  hitchhiker  0.00000200864 
 
 
-
 
NC_009636  Smed_3248  phosphotransferase system, phosphocarrier protein HPr  39.53 
 
 
97 aa  73.2  0.000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_0665  phosphotransferase system, phosphocarrier protein HPr  40.7 
 
 
89 aa  73.2  0.000000000001  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0324  phosphocarrier protein HPr  46.34 
 
 
89 aa  73.2  0.000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0273003  normal  0.0186594 
 
 
-
 
NC_009832  Spro_4371  phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr)  45.98 
 
 
90 aa  72  0.000000000002  Serratia proteamaculans 568  Bacteria  normal  0.24479  normal  0.72885 
 
 
-
 
NC_012856  Rpic12D_0222  Phosphotransferase system, phosphocarrier protein HPr  37.5 
 
 
89 aa  72  0.000000000002  Ralstonia pickettii 12D  Bacteria  normal  hitchhiker  0.000064621 
 
 
-
 
NC_009720  Xaut_2849  phosphotransferase system, phosphocarrier protein HPr  36.26 
 
 
126 aa  72.8  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.531241  normal  0.30984 
 
 
-
 
NC_010513  Xfasm12_0751  phosphotransferase system HPr enzyme  39.53 
 
 
89 aa  72.4  0.000000000002  Xylella fastidiosa M12  Bacteria  normal  0.862158  n/a   
 
 
-
 
NC_009485  BBta_7372  PTS system phosphocarrier protein HPr  39.53 
 
 
109 aa  72.4  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.912866  normal 
 
 
-
 
NC_002939  GSU1882  phosphocarrier protein HPr  40.7 
 
 
88 aa  71.6  0.000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.38742  n/a   
 
 
-
 
NC_003295  RSc0347  phosphohistidinoprotein-hexose phosphotransferase  37.5 
 
 
89 aa  72  0.000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.648241 
 
 
-
 
NC_007614  Nmul_A0219  HPrNtr  38.37 
 
 
89 aa  71.6  0.000000000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0593  HPrNtr  37.08 
 
 
112 aa  72  0.000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.040328  normal 
 
 
-
 
NC_008740  Maqu_2719  phosphotransferase system, phosphocarrier protein HPr  38.37 
 
 
89 aa  71.6  0.000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0203  Phosphotransferase system, phosphocarrier protein HPr  36.36 
 
 
89 aa  71.2  0.000000000004  Ralstonia pickettii 12J  Bacteria  normal  0.405136  normal  0.268008 
 
 
-
 
NC_010581  Bind_2737  phosphotransferase system, phosphocarrier protein HPr  38.64 
 
 
124 aa  71.2  0.000000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0535175 
 
 
-
 
NC_007643  Rru_A3446  HPrNtr  45 
 
 
112 aa  71.6  0.000000000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2966  phosphotransferase system, phosphocarrier protein HPr  42.35 
 
 
88 aa  71.6  0.000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.351605  n/a   
 
 
-
 
NC_008786  Veis_1281  phosphotransferase system, phosphocarrier protein HPr  40.96 
 
 
89 aa  71.2  0.000000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.544435  normal 
 
 
-
 
NC_007404  Tbd_2413  HPrNtr  42.5 
 
 
89 aa  70.9  0.000000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.981961  normal 
 
 
-
 
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