298 homologs were found in PanDaTox collection
for query gene PXO_06079 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_06079  methylthioribulose-1-phosphate dehydratase  100 
 
 
208 aa  431  1e-120  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.039804  n/a   
 
 
-
 
NC_010717  PXO_00848  methylthioribulose-1-phosphate dehydratase  100 
 
 
208 aa  431  1e-120  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.000215096  n/a   
 
 
-
 
NC_011071  Smal_1782  methylthioribulose-1-phosphate dehydratase  81.82 
 
 
213 aa  347  9e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.249759 
 
 
-
 
NC_010513  Xfasm12_1410  methylthioribulose-1-phosphate dehydratase  74.24 
 
 
218 aa  308  2.9999999999999997e-83  Xylella fastidiosa M12  Bacteria  normal  0.238632  n/a   
 
 
-
 
NC_010577  XfasM23_1343  methylthioribulose-1-phosphate dehydratase  74.24 
 
 
218 aa  308  5e-83  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2623  methylthioribulose-1-phosphate dehydratase  57.38 
 
 
207 aa  216  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0907  class II aldolase/adducin family protein  53.81 
 
 
208 aa  204  9e-52  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_42740  methylthioribulose-1-phosphate dehydratase  52.28 
 
 
205 aa  188  4e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3589  methylthioribulose-1-phosphate dehydratase  52.28 
 
 
205 aa  186  2e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1724  methylthioribulose-1-phosphate dehydratase  50.78 
 
 
208 aa  183  2.0000000000000003e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2045  class II aldolase/adducin domain protein  50.52 
 
 
204 aa  179  2e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0362341  n/a   
 
 
-
 
NC_007005  Psyr_1855  methylthioribulose-1-phosphate dehydratase  50.53 
 
 
204 aa  179  2e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.123422  normal  0.880882 
 
 
-
 
NC_002977  MCA0799  methylthioribulose-1-phosphate dehydratase  51.3 
 
 
227 aa  179  2.9999999999999997e-44  Methylococcus capsulatus str. Bath  Bacteria  normal  0.540069  n/a   
 
 
-
 
NC_011126  HY04AAS1_1514  methylthioribulose-1-phosphate dehydratase  43.92 
 
 
203 aa  177  1e-43  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.430865  n/a   
 
 
-
 
NC_010465  YPK_3321  methylthioribulose-1-phosphate dehydratase  48.68 
 
 
222 aa  175  5e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_23780  methylthioribulose-1-phosphate dehydratase  50.26 
 
 
206 aa  174  6e-43  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3182  methylthioribulose-1-phosphate dehydratase  48.15 
 
 
222 aa  173  1.9999999999999998e-42  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3331  methylthioribulose-1-phosphate dehydratase  48.15 
 
 
222 aa  173  1.9999999999999998e-42  Yersinia pestis Angola  Bacteria  normal  normal  0.903838 
 
 
-
 
NC_009832  Spro_0942  methylthioribulose-1-phosphate dehydratase  48.68 
 
 
206 aa  171  7.999999999999999e-42  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0885  methylthioribulose-1-phosphate dehydratase  47.62 
 
 
204 aa  170  1e-41  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0918  methylthioribulose-1-phosphate dehydratase  47.37 
 
 
205 aa  169  3e-41  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3303  methylthioribulose-1-phosphate dehydratase  47.09 
 
 
205 aa  168  7e-41  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1852  class II aldolase/adducin family protein  46.07 
 
 
207 aa  164  8e-40  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.604682  normal  0.0869346 
 
 
-
 
NC_013421  Pecwa_3457  methylthioribulose-1-phosphate dehydratase  46.56 
 
 
205 aa  164  1.0000000000000001e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1415  methylthioribulose-1-phosphate dehydratase  47.4 
 
 
208 aa  163  2.0000000000000002e-39  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1143  methylthioribulose-1-phosphate dehydratase  41.45 
 
 
204 aa  157  1e-37  Enterobacter sp. 638  Bacteria  normal  normal  0.763715 
 
 
-
 
NC_013889  TK90_1788  methylthioribulose-1-phosphate dehydratase  42.86 
 
 
206 aa  152  5e-36  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00210025  normal  0.0224188 
 
 
-
 
NC_009484  Acry_0017  methylthioribulose-1-phosphate dehydratase  47.8 
 
 
213 aa  147  1.0000000000000001e-34  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2510  methylthioribulose-1-phosphate dehydratase  44.39 
 
 
216 aa  140  1.9999999999999998e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.490663  normal 
 
 
-
 
NC_007604  Synpcc7942_1993  methylthioribulose-1-phosphate dehydratase  43.46 
 
 
206 aa  137  7.999999999999999e-32  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.5622 
 
 
-
 
NC_010730  SYO3AOP1_1268  methylthioribulose-1-phosphate dehydratase  35.2 
 
 
215 aa  133  1.9999999999999998e-30  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1845  putative sugar aldolase  40 
 
 
206 aa  129  4.0000000000000003e-29  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0490  methylthioribulose-1-phosphate dehydratase  36.84 
 
 
195 aa  120  9.999999999999999e-27  Synechococcus sp. CC9605  Bacteria  normal  0.290986  normal  0.370435 
 
 
-
 
NC_013205  Aaci_0098  methylthioribulose-1-phosphate dehydratase  38.38 
 
 
211 aa  119  3e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.241921  n/a   
 
 
-
 
NC_013411  GYMC61_1747  methylthioribulose-1-phosphate dehydratase  37.62 
 
 
210 aa  115  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS3948  methylthioribulose-1-phosphate dehydratase  35.71 
 
 
212 aa  114  1.0000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3780  methylthioribulose-1-phosphate dehydratase  35.71 
 
 
212 aa  114  1.0000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.79505  n/a   
 
 
-
 
NC_011773  BCAH820_4059  methylthioribulose-1-phosphate dehydratase  35.71 
 
 
212 aa  114  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B1091  methylthioribulose-1-phosphate dehydratase  35.71 
 
 
212 aa  114  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_4257  methylthioribulose-1-phosphate dehydratase  35.71 
 
 
212 aa  114  1.0000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4147  methylthioribulose-1-phosphate dehydratase  35.71 
 
 
212 aa  114  1.0000000000000001e-24  Bacillus cereus B4264  Bacteria  normal  0.0451904  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3867  methylthioribulose-1-phosphate dehydratase  35.2 
 
 
212 aa  114  1.0000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_21771  putative sugar aldolase  34.85 
 
 
207 aa  114  1.0000000000000001e-24  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0878998 
 
 
-
 
NC_006274  BCZK3795  methylthioribulose-1-phosphate dehydratase  35.71 
 
 
212 aa  113  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4105  methylthioribulose-1-phosphate dehydratase  35.2 
 
 
212 aa  112  3e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4169  methylthioribulose-1-phosphate dehydratase  34.38 
 
 
212 aa  112  4.0000000000000004e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000628786  n/a   
 
 
-
 
NC_012793  GWCH70_0852  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
213 aa  110  2.0000000000000002e-23  Geobacillus sp. WCH70  Bacteria  normal  0.269604  n/a   
 
 
-
 
NC_009674  Bcer98_2737  methylthioribulose-1-phosphate dehydratase  34.8 
 
 
212 aa  107  2e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0029503  n/a   
 
 
-
 
NC_011206  Lferr_0598  methylthioribulose-1-phosphate dehydratase  34.36 
 
 
206 aa  94.4  1e-18  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.635649  normal 
 
 
-
 
NC_011761  AFE_0436  aldolase, class II  34.36 
 
 
206 aa  94.4  1e-18  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1578  methylthioribulose-1-phosphate dehydratase  31.22 
 
 
204 aa  92.8  4e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1603  methylthioribulose-1-phosphate dehydratase  31.22 
 
 
204 aa  92.8  4e-18  Cyanothece sp. PCC 8802  Bacteria  normal  0.648125  normal 
 
 
-
 
NC_011729  PCC7424_0307  methylthioribulose-1-phosphate dehydratase  32.28 
 
 
205 aa  89  4e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.284092 
 
 
-
 
NC_008312  Tery_4305  class II aldolase/adducin-like  30.81 
 
 
252 aa  86.3  3e-16  Trichodesmium erythraeum IMS101  Bacteria  hitchhiker  0.00261955  normal  0.128677 
 
 
-
 
NC_013093  Amir_0986  methylthioribulose-1-phosphate dehydratase  35.52 
 
 
206 aa  72.8  0.000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2031  class II aldolase/adducin family protein  32.1 
 
 
211 aa  72.4  0.000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011697  PHATRDRAFT_31147  predicted protein  27.67 
 
 
559 aa  72  0.000000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0700452  n/a   
 
 
-
 
NC_013440  Hoch_4248  methylthioribulose-1-phosphate dehydratase  29.08 
 
 
226 aa  68.2  0.00000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.144051  normal 
 
 
-
 
NC_013411  GYMC61_2736  L-ribulose-5-phosphate 4-epimerase  34.03 
 
 
228 aa  67.4  0.0000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A1383  hypothetical protein  24.37 
 
 
209 aa  67  0.0000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3961  hypothetical protein  24.37 
 
 
209 aa  67  0.0000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1246  hypothetical protein  23.38 
 
 
209 aa  66.2  0.0000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1055  hypothetical protein  22.22 
 
 
209 aa  65.5  0.0000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1223  hypothetical protein  23.38 
 
 
209 aa  65.5  0.0000000005  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1319  L-ribulose-5-phosphate 4-epimerase  30.9 
 
 
231 aa  65.1  0.0000000008  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_0650  class II aldolase/adducin family protein  38.82 
 
 
222 aa  64.3  0.000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.249121  n/a   
 
 
-
 
NC_009456  VC0395_0985  L-ribulose-5-phosphate 4-epimerase  27.54 
 
 
230 aa  64.7  0.000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0398  class II aldolase/adducin family protein  28.93 
 
 
214 aa  63.9  0.000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1221  hypothetical protein  22.89 
 
 
209 aa  63.2  0.000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00266219  n/a   
 
 
-
 
NC_011773  BCAH820_1420  hypothetical protein  22.89 
 
 
209 aa  63.2  0.000000003  Bacillus cereus AH820  Bacteria  n/a    normal  0.0306976 
 
 
-
 
NC_011830  Dhaf_3764  class II aldolase/adducin family protein  29.78 
 
 
212 aa  63.2  0.000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00716825  n/a   
 
 
-
 
NC_009441  Fjoh_1120  L-ribulose-5-phosphate 4-epimerase  28 
 
 
233 aa  62.8  0.000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_0711  class II aldolase/adducin family protein  27.92 
 
 
222 aa  62.8  0.000000003  Caldivirga maquilingensis IC-167  Archaea  hitchhiker  0.00125122  unclonable  2.5701e-17 
 
 
-
 
NC_008148  Rxyl_1678  class II aldolase/adducin-like protein  29.57 
 
 
215 aa  62.4  0.000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.672374  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0328  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  62  0.000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1486  hypothetical protein  22.89 
 
 
209 aa  62.4  0.000000005  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0966  class II aldolase/adducin family protein  31.95 
 
 
217 aa  62  0.000000006  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4769  class II aldolase/adducin family protein  37.62 
 
 
227 aa  61.6  0.000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1445  hypothetical protein  23.27 
 
 
209 aa  61.2  0.000000009  Bacillus cereus ATCC 10987  Bacteria  normal  0.0428238  n/a   
 
 
-
 
NC_011725  BCB4264_A0395  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  61.2  0.00000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0444  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  60.5  0.00000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4923  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  60.1  0.00000002  Bacillus cereus G9842  Bacteria  normal  0.191657  normal 
 
 
-
 
NC_011658  BCAH187_A0442  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  60.5  0.00000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0333  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  59.7  0.00000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.618561  n/a   
 
 
-
 
NC_005957  BT9727_0317  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  59.7  0.00000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0320  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  59.7  0.00000003  Bacillus cereus E33L  Bacteria  normal  0.4164  n/a   
 
 
-
 
NC_010003  Pmob_0128  class II aldolase/adducin family protein  25.98 
 
 
214 aa  59.7  0.00000003  Petrotoga mobilis SJ95  Bacteria  normal  0.717156  n/a   
 
 
-
 
NC_011773  BCAH820_0380  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  59.7  0.00000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2810  class II aldolase/adducin family protein  27.55 
 
 
332 aa  59.7  0.00000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0348  L-fuculose phosphate aldolase  28.49 
 
 
213 aa  59.3  0.00000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0695  class II aldolase/adducin family protein  25.93 
 
 
428 aa  59.3  0.00000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1290  class II aldolase/adducin family protein  26.47 
 
 
265 aa  58.9  0.00000005  Clostridium cellulolyticum H10  Bacteria  normal  0.984063  n/a   
 
 
-
 
NC_011080  SNSL254_A3955  L-ribulose-5-phosphate 4-epimerase  30.77 
 
 
231 aa  58.9  0.00000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0559727  normal  0.918987 
 
 
-
 
NC_013205  Aaci_2898  class II aldolase/adducin family protein  28.49 
 
 
236 aa  58.5  0.00000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.38221  n/a   
 
 
-
 
NC_011149  SeAg_B3891  L-ribulose-5-phosphate 4-epimerase  30.77 
 
 
231 aa  58.5  0.00000008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2062  class II aldolase/adducin family protein  29.17 
 
 
219 aa  58.5  0.00000008  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00000402268  n/a   
 
 
-
 
NC_009513  Lreu_0481  L-ribulose-5-phosphate 4-epimerase  29.59 
 
 
242 aa  58.2  0.00000008  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
BN001302  ANIA_03593  class II aldolase/adducin domain protein (AFU_orthologue; AFUA_4G12840)  24.65 
 
 
240 aa  58.2  0.00000009  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.931983 
 
 
-
 
NC_004116  SAG1810  L-ribulose-5-phosphate 4-epimerase  28.74 
 
 
238 aa  58.2  0.00000009  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00111407  n/a   
 
 
-
 
NC_011662  Tmz1t_3293  class II aldolase/adducin family protein  29.57 
 
 
229 aa  57.8  0.0000001  Thauera sp. MZ1T  Bacteria  normal  0.178192  n/a   
 
 
-
 
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