12 homologs were found in PanDaTox collection
for query gene PXO_00221 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00221  tetratricopeptide repeat domain protein  100 
 
 
236 aa  466  9.999999999999999e-131  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0582  TPR repeat-containing protein  29.2 
 
 
222 aa  51.2  0.00001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.149034  normal 
 
 
-
 
NC_007614  Nmul_A1206  hypothetical protein  22.92 
 
 
436 aa  50.8  0.00002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1568  TPR repeat-containing protein  27.81 
 
 
219 aa  47.4  0.0002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0037  tetratricopeptide TPR_2  26.74 
 
 
466 aa  47  0.0003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1625  truncated C-type cytochrome biogenesis protein  28.39 
 
 
219 aa  44.7  0.001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0377  putative cytochrome c-type biogenesis protein  29.47 
 
 
312 aa  43.5  0.003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0131086 
 
 
-
 
NC_010717  PXO_00857  C-type cytochrome biogenesis protein  27.27 
 
 
337 aa  43.5  0.003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0160973  n/a   
 
 
-
 
NC_010717  PXO_06070  C-type cytochrome biogenesis protein  27.27 
 
 
337 aa  43.5  0.003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  decreased coverage  0.0000967954  n/a   
 
 
-
 
NC_011083  SeHA_C4144  cytochrome c-type biogenesis protein H2  27.27 
 
 
347 aa  42.7  0.004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4023  cytochrome c-type biogenesis protein H2  30.3 
 
 
347 aa  42  0.007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2473  cytochrome c-type biogenesis protein H2  30 
 
 
347 aa  41.6  0.01  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.677618  normal 
 
 
-
 
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