4 homologs were found in PanDaTox collection
for query gene PSPTO_5539 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_5539  hypothetical protein  100 
 
 
151 aa  291  1e-78  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.466493  n/a   
 
 
-
 
NC_009656  PSPA7_2699  hypothetical protein  41.6 
 
 
150 aa  81.6  0.000000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0007  hypothetical protein  44.27 
 
 
144 aa  77  0.00000000000008  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_31740  hypothetical protein  40.8 
 
 
150 aa  75.5  0.0000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000149688  normal 
 
 
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