16 homologs were found in PanDaTox collection
for query gene PSPTO_1850 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1850  hypothetical protein  100 
 
 
532 aa  1082    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.158477  n/a   
 
 
-
 
NC_010681  Bphyt_3854  hypothetical protein  39.33 
 
 
1251 aa  386  1e-106  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3816  hypothetical protein  31.68 
 
 
753 aa  257  4e-67  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00625268 
 
 
-
 
NC_009485  BBta_3311  XRE family transcriptional regulator  28.27 
 
 
1352 aa  174  3.9999999999999995e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.184729  normal 
 
 
-
 
NC_007510  Bcep18194_A6201  XRE family transcriptional regulator  28.6 
 
 
1350 aa  155  2e-36  Burkholderia sp. 383  Bacteria  normal  0.692672  normal 
 
 
-
 
NC_013131  Caci_4051  XRE family transcriptional regulator  28.95 
 
 
1269 aa  155  2e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.544499  normal  0.21664 
 
 
-
 
NC_013510  Tcur_2546  hypothetical protein  25.92 
 
 
1260 aa  152  2e-35  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00453423  n/a   
 
 
-
 
NC_009523  RoseRS_0279  hypothetical protein  27.66 
 
 
1271 aa  149  1.0000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.0426649  unclonable  0.0000349797 
 
 
-
 
NC_008322  Shewmr7_3900  hypothetical protein  26.87 
 
 
1180 aa  146  8.000000000000001e-34  Shewanella sp. MR-7  Bacteria  normal  normal  0.380579 
 
 
-
 
NC_009943  Dole_2346  hypothetical protein  25.56 
 
 
862 aa  138  3.0000000000000003e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2644  putative addiction module  26.16 
 
 
1365 aa  137  4e-31  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5561  transcriptional regulator (lambda repressor-like DNA-binding domain)  27.15 
 
 
1346 aa  135  1.9999999999999998e-30  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0681  hypothetical protein  25.48 
 
 
1253 aa  133  9e-30  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00452665  n/a   
 
 
-
 
NC_009999  Sbal195_4593  XRE family plasmid maintenance system antidote protein  30.86 
 
 
1370 aa  132  2.0000000000000002e-29  Shewanella baltica OS195  Bacteria  normal  0.387666  normal  0.556972 
 
 
-
 
NC_013216  Dtox_1422  XRE family transcriptional regulator  24.9 
 
 
1242 aa  127  6e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008942  Mlab_0982  hypothetical protein  21.55 
 
 
1133 aa  87.8  5e-16  Methanocorpusculum labreanum Z  Archaea  normal  0.276758  normal 
 
 
-
 
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