6 homologs were found in PanDaTox collection
for query gene PSPTO_0279 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_0279  hypothetical protein  100 
 
 
118 aa  238  2e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0125  hypothetical protein  86.44 
 
 
118 aa  214  4e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.827385 
 
 
-
 
NC_007005  Psyr_0126  hypothetical protein  45.83 
 
 
146 aa  50.4  0.000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.845594 
 
 
-
 
NC_013421  Pecwa_2495  TM2 domain containing protein  76 
 
 
99 aa  48.5  0.00003  Pectobacterium wasabiae WPP163  Bacteria  normal  0.2077  n/a   
 
 
-
 
NC_004578  PSPTO_0278  hypothetical protein  72 
 
 
146 aa  44.7  0.0005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.951062  n/a   
 
 
-
 
NC_012791  Vapar_0597  hypothetical protein  64 
 
 
137 aa  42  0.003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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