79 homologs were found in PanDaTox collection
for query gene PSPTO_0025 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_0025  hydrolase, haloacid dehalogenase-like family  100 
 
 
209 aa  431  1e-120  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1444  HAD superfamily hydrolase  33.33 
 
 
199 aa  99.4  3e-20  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000160322  n/a   
 
 
-
 
NC_013441  Gbro_1688  Haloacid dehalogenase domain protein hydrolase  37.5 
 
 
230 aa  56.6  0.0000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.520793  n/a   
 
 
-
 
NC_009077  Mjls_0731  HAD family hydrolase  36.67 
 
 
230 aa  55.8  0.0000005  Mycobacterium sp. JLS  Bacteria  normal  0.361662  normal  0.481509 
 
 
-
 
NC_008705  Mkms_0751  HAD family hydrolase  36.67 
 
 
230 aa  55.8  0.0000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.170461 
 
 
-
 
NC_008554  Sfum_0796  HAD family hydrolase  31.45 
 
 
231 aa  55.5  0.0000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.727225 
 
 
-
 
NC_008146  Mmcs_0737  HAD family hydrolase  36.67 
 
 
230 aa  55.8  0.0000005  Mycobacterium sp. MCS  Bacteria  normal  0.421268  n/a   
 
 
-
 
NC_008312  Tery_3660  hydrolase  31.15 
 
 
234 aa  55.5  0.0000006  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.150551 
 
 
-
 
NC_009338  Mflv_0023  HAD family hydrolase  34.69 
 
 
228 aa  53.5  0.000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.922489 
 
 
-
 
NC_002967  TDE1878  HAD superfamily hydrolase  37.93 
 
 
261 aa  53.1  0.000003  Treponema denticola ATCC 35405  Bacteria  normal  0.0128231  n/a   
 
 
-
 
NC_002936  DET0533  HAD family hydrolase  25 
 
 
234 aa  52  0.000006  Dehalococcoides ethenogenes 195  Bacteria  normal  0.298334  n/a   
 
 
-
 
NC_009051  Memar_2188  HAD family hydrolase  26.57 
 
 
220 aa  51.6  0.000008  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011886  Achl_2262  HAD-superfamily hydrolase, subfamily IA, variant 1  25.9 
 
 
248 aa  51.6  0.000009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000545934 
 
 
-
 
NC_014210  Ndas_1951  HAD-superfamily hydrolase, subfamily IA, variant 1  28.12 
 
 
244 aa  50.8  0.00001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.305812  hitchhiker  0.0035955 
 
 
-
 
NC_009455  DehaBAV1_0509  HAD family hydrolase  25 
 
 
234 aa  51.2  0.00001  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0949  HAD family hydrolase  31.46 
 
 
235 aa  51.2  0.00001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.60922  normal 
 
 
-
 
NC_002967  TDE1762  HAD superfamily hydrolase  28.57 
 
 
239 aa  50.1  0.00002  Treponema denticola ATCC 35405  Bacteria  normal  0.0794121  n/a   
 
 
-
 
NC_013131  Caci_2475  Haloacid dehalogenase domain protein hydrolase  30.69 
 
 
232 aa  50.8  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2373  HAD family hydrolase  37.8 
 
 
253 aa  50.1  0.00003  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00605014 
 
 
-
 
NC_007413  Ava_0809  HAD family hydrolase  25.93 
 
 
218 aa  49.7  0.00003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2255  HAD family hydrolase  35.29 
 
 
228 aa  48.9  0.00005  Salinispora tropica CNB-440  Bacteria  normal  0.169768  normal  0.797248 
 
 
-
 
NC_010511  M446_5307  haloacid dehalogenase, type II  28.12 
 
 
234 aa  48.9  0.00006  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.031599 
 
 
-
 
NC_008541  Arth_2525  HAD family hydrolase  27.14 
 
 
245 aa  48.1  0.00009  Arthrobacter sp. FB24  Bacteria  normal  0.0221998  n/a   
 
 
-
 
NC_011992  Dtpsy_2051  HAD-superfamily hydrolase, subfamily IA, variant 1  31.5 
 
 
230 aa  48.1  0.0001  Acidovorax ebreus TPSY  Bacteria  normal  0.0164056  n/a   
 
 
-
 
NC_013510  Tcur_3972  HAD-superfamily hydrolase, subfamily IA, variant 1  31.2 
 
 
220 aa  48.1  0.0001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0264  hypothetical protein  33.33 
 
 
211 aa  47.8  0.0001  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.247484 
 
 
-
 
NC_011658  BCAH187_A3930  hydrolase, HAD superfamily  24.06 
 
 
207 aa  47.8  0.0001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2509  HAD family hydrolase  29.91 
 
 
217 aa  47.8  0.0001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0142502 
 
 
-
 
NC_011772  BCG9842_B2564  2-haloalkanoic acid dehalogenase  28.71 
 
 
255 aa  47  0.0002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00980265 
 
 
-
 
NC_011725  BCB4264_A2738  hydrolase, haloacid dehalogenase-like family  29.7 
 
 
230 aa  47  0.0002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0872  HAD-superfamily hydrolase, subfamily IA, variant 3  32.74 
 
 
230 aa  47.4  0.0002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0530  haloacid dehalogenase, type II  23.53 
 
 
229 aa  46.6  0.0003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2677  HAD family hydrolase  25.18 
 
 
222 aa  46.2  0.0003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007949  Bpro_5186  haloacid dehalogenase, type II  23.53 
 
 
229 aa  46.6  0.0003  Polaromonas sp. JS666  Bacteria  normal  0.828389  normal  0.288245 
 
 
-
 
NC_013552  DhcVS_474  HAD-superfamily hydrolase, subfamily IA  20.57 
 
 
234 aa  46.2  0.0004  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0361  HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like)  36 
 
 
203 aa  46.2  0.0004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.751245  n/a   
 
 
-
 
NC_013457  VEA_000783  5'-nucleotidase yjjG  29.77 
 
 
224 aa  46.2  0.0004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2747  HAD superfamily hydrolase  43.4 
 
 
230 aa  45.4  0.0005  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00479401  n/a   
 
 
-
 
NC_009784  VIBHAR_06682  nucleotidase  29.01 
 
 
224 aa  45.8  0.0005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014148  Plim_2884  Haloacid dehalogenase domain protein hydrolase  29.52 
 
 
202 aa  45.4  0.0006  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1653  HAD family hydrolase  30.71 
 
 
230 aa  45.4  0.0007  Acidovorax sp. JS42  Bacteria  normal  0.144199  normal  0.146413 
 
 
-
 
NC_008340  Mlg_1990  HAD family hydrolase  29.06 
 
 
234 aa  45.1  0.0008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.169915  normal  0.0795934 
 
 
-
 
NC_013161  Cyan8802_0709  REG-2-like, HAD superfamily (subfamily IA) hydrolase  23.81 
 
 
233 aa  44.7  0.0009  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0854656 
 
 
-
 
NC_011726  PCC8801_0682  REG-2-like, HAD superfamily (subfamily IA) hydrolase  23.81 
 
 
233 aa  44.7  0.0009  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_1751  HAD-superfamily hydrolase, subfamily IA, variant 1  26.27 
 
 
230 aa  44.7  0.001  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.0000165887  normal  0.0449788 
 
 
-
 
NC_009380  Strop_0720  HAD family hydrolase  26.44 
 
 
292 aa  44.3  0.001  Salinispora tropica CNB-440  Bacteria  normal  normal  0.070073 
 
 
-
 
NC_005957  BT9727_3623  HAD superfamily hydrolase  23.19 
 
 
225 aa  44.7  0.001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.95626  n/a   
 
 
-
 
NC_006274  BCZK2458  HAD superfamily hydrolase  45.28 
 
 
231 aa  44.7  0.001  Bacillus cereus E33L  Bacteria  normal  0.536577  n/a   
 
 
-
 
NC_007333  Tfu_2117  HAD family hydrolase  37.5 
 
 
210 aa  44.7  0.001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2782  hydrolase, haloacid dehalogenase-like family  43.4 
 
 
230 aa  44.3  0.001  Bacillus cereus AH187  Bacteria  normal  0.195747  n/a   
 
 
-
 
NC_009523  RoseRS_1151  HAD family hydrolase  35.29 
 
 
219 aa  43.5  0.002  Roseiflexus sp. RS-1  Bacteria  normal  0.205266  hitchhiker  0.00490249 
 
 
-
 
NC_013093  Amir_6008  HAD-superfamily hydrolase, subfamily IA, variant 1  27.35 
 
 
227 aa  43.9  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2328  REG-2-like, HAD superfamily (subfamily IA) hydrolase  31.58 
 
 
245 aa  43.5  0.002  Cyanothece sp. PCC 7425  Bacteria  normal  0.139585  normal 
 
 
-
 
NC_009485  BBta_2295  putative phosphoglycolate phosphatase  29.73 
 
 
234 aa  43.9  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.768888 
 
 
-
 
NC_009972  Haur_0172  HAD family hydrolase  28.1 
 
 
233 aa  43.9  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00286401  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2426  HAD family hydrolase  27.52 
 
 
225 aa  43.9  0.002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0509966  n/a   
 
 
-
 
NC_005957  BT9727_2494  HAD superfamily hydrolase  41.51 
 
 
231 aa  43.1  0.003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000287122  n/a   
 
 
-
 
NC_013159  Svir_35120  haloacid dehalogenase superfamily protein  33.33 
 
 
228 aa  43.1  0.003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.860746 
 
 
-
 
NC_005945  BAS2534  HAD superfamily hydrolase  41.51 
 
 
231 aa  43.1  0.003  Bacillus anthracis str. Sterne  Bacteria  normal  0.0986265  n/a   
 
 
-
 
NC_013131  Caci_0064  HAD-superfamily hydrolase, subfamily IA, variant 1  28.68 
 
 
250 aa  43.1  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_2720  HAD superfamily hydrolase  41.51 
 
 
230 aa  43.1  0.003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2904  HAD-superfamily hydrolase, subfamily IA, variant 1  31.68 
 
 
238 aa  43.5  0.003  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010524  Lcho_2564  HAD family hydrolase  27.68 
 
 
231 aa  42.7  0.004  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0054388 
 
 
-
 
NC_011832  Mpal_0992  HAD-superfamily hydrolase, subfamily IA, variant 1  28.03 
 
 
235 aa  42.7  0.004  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.0708331 
 
 
-
 
NC_011071  Smal_0262  HAD-superfamily hydrolase, subfamily IA, variant 1  35.58 
 
 
239 aa  42.7  0.004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.381468 
 
 
-
 
NC_006682  CNM01740  hypothetical protein  25.87 
 
 
255 aa  42.4  0.005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_008578  Acel_0234  HAD family hydrolase  32.26 
 
 
225 aa  42.4  0.005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.961854 
 
 
-
 
NC_009438  Sputcn32_3556  HAD family hydrolase  25 
 
 
233 aa  42.4  0.005  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1476  HAD-superfamily hydrolase, subfamily IA, variant 1  29.46 
 
 
259 aa  42.4  0.005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.644028  normal  0.407764 
 
 
-
 
NC_014248  Aazo_4818  REG-2-like HAD superfamily hydrolase  30.68 
 
 
217 aa  42.4  0.006  'Nostoc azollae' 0708  Bacteria  normal  0.153483  n/a   
 
 
-
 
NC_014165  Tbis_2725  HAD-superfamily hydrolase  28.24 
 
 
224 aa  42  0.006  Thermobispora bispora DSM 43833  Bacteria  normal  0.305002  normal 
 
 
-
 
NC_012669  Bcav_0889  HAD-superfamily hydrolase, subfamily IA, variant 1  29.52 
 
 
221 aa  42.4  0.006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.68663  normal  0.226344 
 
 
-
 
NC_010717  PXO_02868  hydrolase  33.33 
 
 
245 aa  42  0.007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3360  HAD family hydrolase  26.72 
 
 
251 aa  42  0.007  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000863998  n/a   
 
 
-
 
NC_009921  Franean1_2832  HAD family hydrolase  27 
 
 
248 aa  42  0.007  Frankia sp. EAN1pec  Bacteria  normal  0.106168  normal 
 
 
-
 
NC_009667  Oant_2746  HAD family hydrolase  45.83 
 
 
226 aa  42  0.007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.20923  n/a   
 
 
-
 
NC_009376  Pars_1323  HAD family hydrolase  28.15 
 
 
269 aa  42  0.007  Pyrobaculum arsenaticum DSM 13514  Archaea  hitchhiker  0.00954891  normal 
 
 
-
 
NC_008009  Acid345_0142  HAD family hydrolase  22.04 
 
 
212 aa  42  0.007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.0023385 
 
 
-
 
NC_004311  BRA1167  HAD superfamily hydrolase  35.62 
 
 
214 aa  41.6  0.008  Brucella suis 1330  Bacteria  normal  0.484596  n/a   
 
 
-
 
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