4 homologs were found in PanDaTox collection
for query gene PSPTOA0012 on replicon NC_004633
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004633  PSPTOA0012  type III effector HopX1  100 
 
 		 384 aa  785    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.38885  n/a   
 
 
-
 
NC_007005  Psyr_1220  type III effector HopX1  72.25 
 
 		 382 aa  510  1e-143  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc3369  putative AVRPPHE avirulence protein  26.2 
 
 		 425 aa  90.9  4e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3452  hypothetical protein  29.41 
 
 		 374 aa  49.7  0.00009  Acidovorax citrulli AAC00-1  Bacteria  normal  0.448571  normal  0.315127 
 
 
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