15 homologs were found in PanDaTox collection
for query gene PSPA7_5357 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009656  PSPA7_5357  AlpA family transcriptional regulator  100 
 
 		 70 aa  145  2.0000000000000003e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_1082  hypothetical protein  55.22 
 
 		 72 aa  88.6  3e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.385899  n/a   
 
 
-
 
NC_009076  BURPS1106A_3698  prophage CP4-57 regulatory protein (AlpA)  34.48 
 
 		 70 aa  48.9  0.00002  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2796  phage transcriptional regulator, AlpA  44.64 
 
 		 109 aa  47.8  0.00005  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_1437  prophage CP4-57 regulatory protein (AlpA)  40.68 
 
 		 69 aa  47.4  0.00007  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_2784  phage transcriptional regulator, AlpA  37.5 
 
 		 66 aa  45.4  0.0002  Shewanella sp. MR-4  Bacteria  normal  0.834885  normal  0.857348 
 
 
-
 
NC_007404  Tbd_2822  transcriptional regulator  34.78 
 
 		 98 aa  44.3  0.0005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.15617  normal  1 
 
 
-
 
NC_007951  Bxe_A1751  Phage transcriptional regulator, AlpA  43.08 
 
 		 79 aa  43.9  0.0007  Burkholderia xenovorans LB400  Bacteria  normal  0.1124  normal  0.416635 
 
 
-
 
NC_007404  Tbd_2677  transcriptional regulator  40.62 
 
 		 70 aa  43.1  0.001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008309  HS_1424  phage transcriptional regulator, AlpA  39.66 
 
 		 61 aa  41.6  0.003  Haemophilus somnus 129PT  Bacteria  normal  0.435044  n/a   
 
 
-
 
NC_009075  BURPS668_A2390  prophage CP4-57 regulatory protein (AlpA)  37.5 
 
 		 78 aa  42  0.003  Burkholderia pseudomallei 668  Bacteria  normal  0.179728  n/a   
 
 
-
 
NC_010682  Rpic_2362  phage transcriptional regulator, AlpA  35.29 
 
 		 76 aa  42  0.003  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.566785 
 
 
-
 
NC_013456  VEA_003245  predicted transcriptional regulator  38 
 
 		 96 aa  41.2  0.004  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3333  phage transcriptional regulator, AlpA  40.35 
 
 		 74 aa  41.2  0.006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.480185  normal  1 
 
 
-
 
NC_007969  Pcryo_2358  phage transcriptional regulator, AlpA  44.19 
 
 		 86 aa  40.4  0.009  Psychrobacter cryohalolentis K5  Bacteria  normal  0.0201012  normal  0.0278403 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>