24 homologs were found in PanDaTox collection
for query gene PSPA7_2884 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_2884  hypothetical protein  100 
 
 
401 aa  808    Pseudomonas aeruginosa PA7  Bacteria  normal  0.228694  n/a   
 
 
-
 
NC_008463  PA14_33910  hypothetical protein  98.5 
 
 
424 aa  799    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0116943  normal  0.200497 
 
 
-
 
NC_013421  Pecwa_3006  extracellular solute-binding protein family 1  41.59 
 
 
379 aa  260  3e-68  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1331  extracellular solute-binding protein family 1  41.59 
 
 
367 aa  256  4e-67  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.294079  n/a   
 
 
-
 
NC_013421  Pecwa_2512  extracellular solute-binding protein family 1  39.38 
 
 
373 aa  239  8e-62  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2013  extracellular solute-binding protein family 1  39.69 
 
 
373 aa  237  2e-61  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2171  extracellular solute-binding protein family 1  38.82 
 
 
373 aa  236  4e-61  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2940  twin-arginine translocation pathway signal  32.15 
 
 
366 aa  151  2e-35  Chelativorans sp. BNC1  Bacteria  normal  0.381466  n/a   
 
 
-
 
NC_012560  Avin_21350  ABC-type Fe3+ transport system, substrate binding component  28.76 
 
 
349 aa  67  0.0000000006  Azotobacter vinelandii DJ  Bacteria  normal  0.180664  n/a   
 
 
-
 
NC_009921  Franean1_4453  extracellular solute-binding protein  24.09 
 
 
356 aa  63.9  0.000000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3199  extracellular solute-binding protein  25 
 
 
338 aa  60.5  0.00000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.680045  n/a   
 
 
-
 
NC_008698  Tpen_1554  extracellular solute-binding protein  25.56 
 
 
354 aa  58.2  0.0000003  Thermofilum pendens Hrk 5  Archaea  normal  0.202841  n/a   
 
 
-
 
NC_011894  Mnod_5871  extracellular solute-binding protein family 1  25.49 
 
 
342 aa  49.7  0.00009  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0432658  n/a   
 
 
-
 
NC_003295  RSc2937  putative periplasmic IRON-binding signal peptide protein  28.2 
 
 
365 aa  48.1  0.0002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3231  extracellular solute-binding protein family 1  23.1 
 
 
325 aa  48.9  0.0002  Dickeya dadantii Ech703  Bacteria  normal  0.416701  n/a   
 
 
-
 
NC_007650  BTH_II1725  ABC transporter, periplasmic substrate-binding protein  27.48 
 
 
362 aa  48.5  0.0002  Burkholderia thailandensis E264  Bacteria  normal  0.0106673  n/a   
 
 
-
 
NC_011769  DvMF_1586  extracellular solute-binding protein family 1  24.08 
 
 
333 aa  46.6  0.0008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_006349  BMAA1128  ABC transporter, periplasmic substrate-binding protein  27.83 
 
 
362 aa  45.1  0.002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1502  ABC transporter, periplasmic substrate-binding protein  27.83 
 
 
362 aa  45.1  0.002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.640725  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0951  ABC transporter, periplasmic-binding protein  27.83 
 
 
362 aa  45.1  0.002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1036  ABC-type Fe3+ transport system, periplasmic component  27.83 
 
 
362 aa  45.1  0.002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0113  ABC transporter, periplasmic substrate-binding protein  27.83 
 
 
362 aa  45.1  0.002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2276  putative periplasmic solute-binding protein  27.83 
 
 
362 aa  45.1  0.002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.72431  n/a   
 
 
-
 
NC_010682  Rpic_3214  extracellular solute-binding protein family 1  27.51 
 
 
368 aa  42.7  0.01  Ralstonia pickettii 12J  Bacteria  normal  0.207758  normal 
 
 
-
 
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