6 homologs were found in PanDaTox collection
for query gene PP_5404 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_5404  transposition protein, TnsC-related protein  100 
 
 		 448 aa  922    Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0234702 
 
 
-
 
NC_010501  PputW619_0036  hypothetical protein  92.82 
 
 		 180 aa  342  8e-93  Pseudomonas putida W619  Bacteria  normal  1  normal  0.32465 
 
 
-
 
NC_007908  Rfer_1053  hypothetical protein  28.95 
 
 		 452 aa  109  1e-22  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_2801  Tn7-like transposition protein C  25.33 
 
 		 551 aa  50.4  0.00005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_3197  Tn5468, transposition protein C  25.33 
 
 		 551 aa  50.4  0.00005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011761  AFE_1203  Tn5468, transposition protein C  24.6 
 
 		 552 aa  47.8  0.0004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
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