9 homologs were found in PanDaTox collection
for query gene PP_1939 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_1939    100 
 
 		 144 bp  285  2.0000000000000002e-75  Pseudomonas putida KT2440  Bacteria  normal  1  unclonable  0.00000046755 
 
 
-
 
NC_009512  Pput_0350  formaldehyde dehydrogenase, glutathione-independent  91.84 
 
 		 1200 bp  65.9  0.000000003  Pseudomonas putida F1  Bacteria  normal  1  normal  0.383522 
 
 
-
 
NC_010501  PputW619_4879  formaldehyde dehydrogenase, glutathione-independent  81.02 
 
 		 1200 bp  65.9  0.000000003  Pseudomonas putida W619  Bacteria  normal  1  normal  0.734833 
 
 
-
 
NC_002947  PP_0328  formaldehyde dehydrogenase, glutathione-independent  89.8 
 
 		 1200 bp  58  0.0000007  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.225321 
 
 
-
 
NC_009439  Pmen_4126  alcohol dehydrogenase  86.44 
 
 		 1200 bp  54  0.00001  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_0351  formaldehyde dehydrogenase, glutathione-independent  87.76 
 
 		 1200 bp  50.1  0.0002  Pseudomonas putida GB-1  Bacteria  normal  0.0853836  normal  0.45592 
 
 
-
 
NC_007492  Pfl01_5202  zinc-containing alcohol dehydrogenase superfamily protein  85.71 
 
 		 1200 bp  48.1  0.0006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.0670131 
 
 
-
 
NC_008463  PA14_71560  glutathione-independent formaldehyde dehydrogenase  87.23 
 
 		 1200 bp  46.1  0.002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_6209  glutathione-independent formaldehyde dehydrogenase  87.23 
 
 		 1200 bp  46.1  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
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