5 homologs were found in PanDaTox collection
for query gene PP_1923 on replicon NC_002947
Organism: Pseudomonas putida KT2440



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1923  hypothetical protein  100 
 
 
333 aa  686    Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000458124 
 
 
-
 
NC_007948  Bpro_3900  hypothetical protein  33.85 
 
 
248 aa  87.8  2e-16  Polaromonas sp. JS666  Bacteria  normal  0.0587102  normal  0.0521155 
 
 
-
 
NC_007614  Nmul_A2756  hypothetical protein  28.93 
 
 
263 aa  79.7  0.00000000000007  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009998  Sbal195_4567  hypothetical protein  26.5 
 
 
251 aa  55.8  0.000001  Shewanella baltica OS195  Bacteria  normal  0.675979  normal 
 
 
-
 
NC_013757  Gobs_3045  hypothetical protein  27.27 
 
 
265 aa  48.9  0.0001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0627531  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>