11 homologs were found in PanDaTox collection
for query gene PP_0318 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_0318  hypothetical protein  100 
 
 
76 aa  142  2e-33  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000233252 
 
 
-
 
NC_009512  Pput_0340  hypothetical protein  100 
 
 
76 aa  142  2e-33  Pseudomonas putida F1  Bacteria  normal  normal  0.780933 
 
 
-
 
NC_010322  PputGB1_0341  hypothetical protein  98.68 
 
 
76 aa  140  6e-33  Pseudomonas putida GB-1  Bacteria  normal  0.12964  normal 
 
 
-
 
NC_010501  PputW619_4889  hypothetical protein  94.74 
 
 
76 aa  136  1e-31  Pseudomonas putida W619  Bacteria  normal  normal  0.484698 
 
 
-
 
NC_007492  Pfl01_0448  hypothetical protein  73.68 
 
 
76 aa  104  5e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.618557  normal 
 
 
-
 
NC_004578  PSPTO_0468  hypothetical protein  71.43 
 
 
85 aa  97.1  7e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4705  hypothetical protein  71.43 
 
 
77 aa  96.3  1e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_18230  hypothetical protein  53.33 
 
 
75 aa  74.3  0.0000000000006  Azotobacter vinelandii DJ  Bacteria  normal  0.449843  n/a   
 
 
-
 
NC_008463  PA14_71360  hypothetical protein  56.34 
 
 
110 aa  71.6  0.000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6193  hypothetical protein  56.34 
 
 
110 aa  71.2  0.000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.955042  n/a   
 
 
-
 
NC_003910  CPS_2579  hypothetical protein  42.42 
 
 
76 aa  41.2  0.004  Colwellia psychrerythraea 34H  Bacteria  normal  0.0164018  n/a   
 
 
-
 
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