8 homologs were found in PanDaTox collection
for query gene PICST_88123 on replicon NC_009042
Organism: Scheffersomyces stipitis CBS 6054



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009042  PICST_88123  Nucleoporin NSP1 (Nuclear pore protein NSP1) (Nucleoskeletal-like protein) (p110)  100 
 
 
727 aa  1402    Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.26666  normal  0.354188 
 
 
-
 
NC_006686  CND03230  conserved hypothetical protein  30.41 
 
 
750 aa  154  7e-36  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001303  ANIA_04499  Nuclear pore complex protein An-Nsp1 (Eurofung)  29.63 
 
 
624 aa  137  6.0000000000000005e-31  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.041249 
 
 
-
 
NC_006670  CNA06440  nucleoporin nsp1, putative  30.68 
 
 
1513 aa  64.7  0.000000006  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009043  PICST_82669  Nucleoskeletal protein  29.86 
 
 
1019 aa  48.9  0.0003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.744572 
 
 
-
 
NC_009355  OSTLU_23918  predicted protein  33.56 
 
 
1000 aa  46.6  0.001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.160353  n/a   
 
 
-
 
NC_009045  PICST_83705  nuclear pore protein  30.49 
 
 
740 aa  46.6  0.002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.170076  normal  0.0148486 
 
 
-
 
NC_011676  PHATRDRAFT_45854  predicted protein  35.37 
 
 
1689 aa  44.3  0.008  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0900508  n/a   
 
 
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