9 homologs were found in PanDaTox collection
for query gene PICST_75133 on replicon NC_009068
Organism: Scheffersomyces stipitis CBS 6054



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
BN001305  ANIA_05579  vacuolar protein sorting-associated protein vps13 (AFU_orthologue; AFUA_4G11560)  40 
 
 
3169 aa  2326    Aspergillus nidulans FGSC A4  Eukaryota  normal  0.105192  normal  0.590199 
 
 
-
 
NC_006685  CNC02260  late endosome to vacuole transport-related protein, putative  33.5 
 
 
3181 aa  1716    Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009068  PICST_75133  vacuolar sorting  100 
 
 
3109 aa  6348    Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.268432 
 
 
-
 
NC_009357  OSTLU_4555  predicted protein  27.2 
 
 
354 aa  152  1.0000000000000001e-34  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_011672  PHATRDRAFT_44551  predicted protein  27.05 
 
 
3905 aa  119  1.0000000000000001e-24  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009368  OSTLU_18116  predicted protein  21.08 
 
 
2283 aa  95.9  1e-17  Ostreococcus lucimarinus CCE9901  Eukaryota  unclonable  0.00383988  normal 
 
 
-
 
NC_009368  OSTLU_27430  predicted protein  21.08 
 
 
4434 aa  95.1  2e-17  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.684907 
 
 
-
 
NC_011683  PHATRDRAFT_47968  predicted protein  24.14 
 
 
4524 aa  94.7  2e-17  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011686  PHATRDRAFT_1143  3R-hydroxyacyl-[acyl carrier protein] dehydrase  34.21 
 
 
529 aa  47.8  0.004  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.606916  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>