18 homologs were found in PanDaTox collection
for query gene PICST_42490 on replicon NC_009042
Organism: Scheffersomyces stipitis CBS 6054



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009042  PICST_42490  predicted protein  100 
 
 
616 aa  1266    Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.814262 
 
 
-
 
NC_006670  CNA06400  chromatin remodeling-related protein, putative  27.6 
 
 
678 aa  84  0.000000000000009  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001307  ANIA_02278  catalytic subunit of the SWI/SNF chromatin remodeling complex (Eurofung)  34.01 
 
 
1407 aa  68.2  0.0000000005  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0444609  normal  0.871565 
 
 
-
 
NC_011670  PHATRDRAFT_54139  predicted protein  35.48 
 
 
995 aa  67.8  0.0000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011669  PHATRDRAFT_42944  predicted protein  45.12 
 
 
1422 aa  66.2  0.000000002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.237933  n/a   
 
 
-
 
NC_009044  PICST_83690  component of SWI/SNF global transcription activator complex  31.88 
 
 
1566 aa  61.6  0.00000004  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.0631887 
 
 
-
 
BN001306  ANIA_03448  component of the RSC chromatin remodeling complex (Eurofung)  33.94 
 
 
884 aa  59.7  0.0000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009048  PICST_85702  Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog)  34.72 
 
 
1259 aa  58.9  0.0000003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.250535  normal 
 
 
-
 
NC_006680  CNK02030  hypothetical protein  39.73 
 
 
1558 aa  58.2  0.0000005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.456325  n/a   
 
 
-
 
NC_009047  PICST_73625  predicted protein  24.41 
 
 
636 aa  55.8  0.000002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.171811  normal 
 
 
-
 
NC_006680  CNK02380  nucleus protein, putative  20.48 
 
 
1275 aa  55.5  0.000003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001303  ANIA_04894  transcriptional activator spt7 (AFU_orthologue; AFUA_3G11000)  34.78 
 
 
1100 aa  52  0.00003  Aspergillus nidulans FGSC A4  Eukaryota  decreased coverage  0.000259105  normal 
 
 
-
 
NC_006684  CNB03400  hypothetical protein  32.38 
 
 
873 aa  48.9  0.0003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.0021041  n/a   
 
 
-
 
NC_009361  OSTLU_93058  predicted protein  27.27 
 
 
1329 aa  47.4  0.0009  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.421971  normal  0.543331 
 
 
-
 
NC_009068  PICST_80611  transcription factor, member of the histone acetyltransferase SAGA complex  32.29 
 
 
1106 aa  47  0.001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.538787  normal  0.471232 
 
 
-
 
NC_006694  CNI03440  conserved hypothetical protein  37.1 
 
 
634 aa  45.4  0.003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0637382  n/a   
 
 
-
 
BN001302  ANIA_03621  histone acetyltransferase (Gcn5), putative (AFU_orthologue; AFUA_4G12650)  28.43 
 
 
414 aa  45.8  0.003  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.128109 
 
 
-
 
NC_009043  PICST_76726  predicted protein  29 
 
 
796 aa  45.1  0.004  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.161071  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>