7 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_44551 on replicon NC_011672
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011672  PHATRDRAFT_44551  predicted protein  100 
 
 
3905 aa  8037    Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
BN001305  ANIA_05579  vacuolar protein sorting-associated protein vps13 (AFU_orthologue; AFUA_4G11560)  22.76 
 
 
3169 aa  125  9.999999999999999e-27  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.105192  normal  0.590199 
 
 
-
 
NC_009068  PICST_75133  vacuolar sorting  27.05 
 
 
3109 aa  112  2e-22  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.268432 
 
 
-
 
NC_006685  CNC02260  late endosome to vacuole transport-related protein, putative  24.16 
 
 
3181 aa  105  2e-20  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009357  OSTLU_4555  predicted protein  24.03 
 
 
354 aa  75.9  0.00000000001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_009368  OSTLU_27430  predicted protein  23.29 
 
 
4434 aa  56.2  0.00001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.684907 
 
 
-
 
NC_009368  OSTLU_18116  predicted protein  23.29 
 
 
2283 aa  55.5  0.00002  Ostreococcus lucimarinus CCE9901  Eukaryota  unclonable  0.00383988  normal 
 
 
-
 
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