More than 300 homologs were found in PanDaTox collection
for query gene PCC7424_3735 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_3735  transcriptional regulator, Crp/Fnr family  100 
 
 
210 aa  426  1e-118  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3340  Crp/FNR family transcriptional regulator  38.69 
 
 
207 aa  145  5e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0648445 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  31.82 
 
 
231 aa  89  5e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  31.15 
 
 
222 aa  85.9  4e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  31.15 
 
 
222 aa  85.9  4e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  27.42 
 
 
228 aa  85.5  5e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  28.04 
 
 
248 aa  82  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  32.78 
 
 
236 aa  82  0.000000000000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  28 
 
 
254 aa  79.7  0.00000000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  28.43 
 
 
228 aa  79  0.00000000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  31.67 
 
 
241 aa  78.2  0.00000000000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  25 
 
 
236 aa  77.4  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  30.36 
 
 
255 aa  75.9  0.0000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  30.56 
 
 
241 aa  75.5  0.0000000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  27.37 
 
 
232 aa  75.9  0.0000000000005  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  28.26 
 
 
246 aa  73.6  0.000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  29.28 
 
 
222 aa  73.9  0.000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  28.26 
 
 
229 aa  73.6  0.000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2845  cyclic nucleotide-binding domain-containing protein  28 
 
 
226 aa  71.2  0.00000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  27.55 
 
 
226 aa  70.9  0.00000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  27.08 
 
 
230 aa  70.1  0.00000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25 
 
 
229 aa  70.5  0.00000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008262  CPR_2531  cyclic nucleotide-binding domain-containing protein  28.81 
 
 
226 aa  70.5  0.00000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  28.89 
 
 
244 aa  69.7  0.00000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  29.52 
 
 
225 aa  69.7  0.00000000003  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  28.89 
 
 
244 aa  69.7  0.00000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.63 
 
 
227 aa  69.3  0.00000000004  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  29.29 
 
 
257 aa  68.9  0.00000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_011901  Tgr7_0642  putative transcriptional regulator, Crp/Fnr family  28.25 
 
 
231 aa  68.9  0.00000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  25.63 
 
 
227 aa  68.2  0.00000000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  25.99 
 
 
236 aa  67.8  0.0000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  27.68 
 
 
244 aa  67.4  0.0000000001  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  27.75 
 
 
272 aa  67.8  0.0000000001  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  27.68 
 
 
244 aa  67.4  0.0000000002  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  26.6 
 
 
225 aa  67  0.0000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  27.68 
 
 
244 aa  67.4  0.0000000002  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_011312  VSAL_I1571  fumarate/nitrate reduction transcriptional regulator  25.14 
 
 
250 aa  66.6  0.0000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.75505  n/a   
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  27.68 
 
 
244 aa  67  0.0000000002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  25.84 
 
 
229 aa  67.4  0.0000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  28.24 
 
 
227 aa  66.2  0.0000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  28.81 
 
 
238 aa  66.2  0.0000000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  26.49 
 
 
229 aa  65.9  0.0000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  23.32 
 
 
234 aa  65.9  0.0000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02295  fumarate/nitrate reduction transcriptional regulator  24.87 
 
 
248 aa  65.5  0.0000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003475  fumarate and nitrate reduction regulatory protein  24.87 
 
 
248 aa  65.5  0.0000000006  Vibrio sp. Ex25  Bacteria  normal  0.292896  n/a   
 
 
-
 
NC_007948  Bpro_1207  Crp/FNR family transcriptional regulator  27.23 
 
 
264 aa  65.1  0.0000000007  Polaromonas sp. JS666  Bacteria  normal  0.494469  normal 
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  27.59 
 
 
238 aa  65.1  0.0000000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  27.59 
 
 
238 aa  65.1  0.0000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.11 
 
 
241 aa  65.1  0.0000000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1939  transcriptional regulator, Crp/Fnr family  29.21 
 
 
235 aa  64.7  0.0000000009  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  28.14 
 
 
225 aa  64.7  0.0000000009  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  28.14 
 
 
225 aa  64.7  0.0000000009  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  27.33 
 
 
227 aa  64.3  0.000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_009457  VC0395_A1045  fumarate/nitrate reduction transcriptional regulator  24.87 
 
 
250 aa  64.3  0.000000001  Vibrio cholerae O395  Bacteria  normal  0.18077  n/a   
 
 
-
 
NC_011992  Dtpsy_1007  transcriptional regulator, Crp/Fnr family  27.89 
 
 
242 aa  64.3  0.000000001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  24.86 
 
 
352 aa  64.3  0.000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  24.86 
 
 
236 aa  64.3  0.000000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008782  Ajs_1091  CRP/FNR family transcriptional regulator  27.89 
 
 
247 aa  64.3  0.000000001  Acidovorax sp. JS42  Bacteria  normal  0.140321  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  24.44 
 
 
229 aa  64.3  0.000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  24.04 
 
 
243 aa  64.3  0.000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_003296  RS02297  transcription regulator protein  25.36 
 
 
225 aa  63.9  0.000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  25.71 
 
 
231 aa  63.5  0.000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  26.29 
 
 
239 aa  63.5  0.000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  25.71 
 
 
231 aa  63.5  0.000000002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  28.31 
 
 
225 aa  63.9  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_008781  Pnap_3775  CRP/FNR family transcriptional regulator  26.32 
 
 
265 aa  63.9  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  22.16 
 
 
249 aa  63.5  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_008752  Aave_1530  Crp/FNR family transcriptional regulator  25.25 
 
 
239 aa  63.9  0.000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.68 
 
 
225 aa  63.9  0.000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  26.63 
 
 
254 aa  63.2  0.000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  21.78 
 
 
231 aa  63.2  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_011138  MADE_02063  transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) protein  25.13 
 
 
222 aa  62.8  0.000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00714534  n/a   
 
 
-
 
NC_012560  Avin_19910  Fnr-like negative transcriptional regulator of CydAB  25.4 
 
 
244 aa  63.2  0.000000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  23.91 
 
 
250 aa  62.8  0.000000004  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_009439  Pmen_2615  CRP/FNR family transcriptional regulator  28.26 
 
 
244 aa  62.8  0.000000004  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00240538  normal  0.855877 
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  26.7 
 
 
244 aa  62.4  0.000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  25.67 
 
 
244 aa  62.8  0.000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  26.37 
 
 
231 aa  62.8  0.000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  23.91 
 
 
250 aa  62.8  0.000000004  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  24.73 
 
 
229 aa  62.4  0.000000005  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  24.39 
 
 
261 aa  62  0.000000005  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  24.39 
 
 
261 aa  62  0.000000005  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1937  Crp/FNR family transcriptional regulator  25.59 
 
 
223 aa  62.4  0.000000005  Rhodoferax ferrireducens T118  Bacteria  normal  0.155753  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  24.77 
 
 
227 aa  62  0.000000006  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  28.74 
 
 
246 aa  62  0.000000007  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  25.28 
 
 
227 aa  61.6  0.000000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  27.72 
 
 
227 aa  61.6  0.000000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  24.43 
 
 
230 aa  61.6  0.000000008  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1123  transcriptional regulator, Crp/Fnr family  28.49 
 
 
220 aa  61.6  0.000000009  Ammonifex degensii KC4  Bacteria  normal  0.244021  n/a   
 
 
-
 
NC_012912  Dd1591_2081  fumarate/nitrate reduction transcriptional regulator  23.4 
 
 
250 aa  61.2  0.000000009  Dickeya zeae Ech1591  Bacteria  normal  0.0488524  n/a   
 
 
-
 
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