7 homologs were found in PanDaTox collection
for query gene PC1_3260 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_3260  hypothetical protein  100 
 
 		 562 aa  1154    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0740  CRISPR-associated RAMP Csm5 family protein  20.48 
 
 		 391 aa  55.8  0.000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1345  CRISPR-associated RAMP Csm5 family protein  21.53 
 
 		 390 aa  54.7  0.000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_1752  hypothetical protein  24.73 
 
 		 380 aa  48.5  0.0003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_0977  hypothetical protein  26.21 
 
 		 357 aa  48.1  0.0004  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_12833  hypothetical protein  23.1 
 
 		 375 aa  47.4  0.0008  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009616  Tmel_1674  CRISPR-associated RAMP Csm5 family protein  20.75 
 
 		 353 aa  46.6  0.001  Thermosipho melanesiensis BI429  Bacteria  normal  0.901558  n/a   
 
 
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