3 homologs were found in PanDaTox collection
for query gene PC1_2647 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_2647  phage-holin analog protein  100 
 
 
100 aa  201  3e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00754716  n/a   
 
 
-
 
NC_011080  SNSL254_A1149  phage-holin analog protein  30.48 
 
 
102 aa  45.8  0.0002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.304822  hitchhiker  0.00000000000000862696 
 
 
-
 
NC_011083  SeHA_C1135  phage-holin analog protein  31.37 
 
 
100 aa  46.2  0.0002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
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