12 homologs were found in PanDaTox collection
for query gene PC1_2630 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_2630  putative DNA-binding protein  100 
 
 		 70 aa  141  3e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0453358  n/a   
 
 
-
 
NC_010465  YPK_2312  putative DNA-binding protein  73.44 
 
 		 67 aa  95.9  2e-19  Yersinia pseudotuberculosis YPIII  Bacteria  decreased coverage  0.000000029822  n/a   
 
 
-
 
NC_011353  ECH74115_2653  putative DNA-binding protein  66.15 
 
 		 67 aa  95.5  2e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.016181  hitchhiker  0.00000967985 
 
 
-
 
NC_009436  Ent638_1343  putative regulator for prophage  41.18 
 
 		 73 aa  55.8  0.0000002  Enterobacter sp. 638  Bacteria  normal  0.023383  normal  0.642024 
 
 
-
 
CP001509  ECD_00818  conserved hypothetical protein  45.31 
 
 		 73 aa  55.5  0.0000003  Escherichia coli BL21(DE3)  Bacteria  normal  0.293441  n/a   
 
 
-
 
NC_009800  EcHS_A0912  hypothetical protein  45.31 
 
 		 73 aa  55.5  0.0000003  Escherichia coli HS  Bacteria  decreased coverage  0.000051582  n/a   
 
 
-
 
NC_010468  EcolC_2792  hypothetical protein  45.31 
 
 		 73 aa  55.5  0.0000003  Escherichia coli ATCC 8739  Bacteria  normal  0.012456  normal  0.090048 
 
 
-
 
NC_012892  B21_00834  hypothetical protein  45.31 
 
 		 73 aa  55.5  0.0000003  Escherichia coli BL21  Bacteria  normal  0.35742  n/a   
 
 
-
 
NC_009052  Sbal_1270  putative regulator for prophage CP-933T  36.67 
 
 		 66 aa  52  0.000003  Shewanella baltica OS155  Bacteria  normal  0.318292  n/a   
 
 
-
 
NC_010465  YPK_0884  hypothetical protein  40.58 
 
 		 76 aa  50.8  0.000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A2949  hypothetical protein  38.78 
 
 		 67 aa  45.8  0.0002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.222662  hitchhiker  1.40637e-23 
 
 
-
 
NC_009784  VIBHAR_05010  hypothetical protein  32.84 
 
 		 70 aa  45.1  0.0003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>