8 homologs were found in PanDaTox collection
for query gene PC1_2156 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_2156  hypothetical protein  100 
 
 
234 aa  484  1e-136  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.189486  n/a   
 
 
-
 
NC_010465  YPK_1703  hypothetical protein  66.23 
 
 
234 aa  303  2.0000000000000002e-81  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1595  hypothetical protein  65.37 
 
 
234 aa  299  3e-80  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.271285  n/a   
 
 
-
 
NC_012917  PC1_0120  hypothetical protein  65.62 
 
 
231 aa  290  9e-78  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1358  hypothetical protein  50.48 
 
 
231 aa  202  5e-51  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.587262  n/a   
 
 
-
 
NC_010159  YpAngola_A3129  hypothetical protein  50.48 
 
 
231 aa  201  9.999999999999999e-51  Yersinia pestis Angola  Bacteria  normal  0.0226841  normal 
 
 
-
 
NC_010498  EcSMS35_0067  hypothetical protein  41.18 
 
 
282 aa  148  8e-35  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.572314 
 
 
-
 
NC_009708  YpsIP31758_1243  hypothetical protein  50.79 
 
 
71 aa  66.6  0.0000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0229837  n/a   
 
 
-
 
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