9 homologs were found in PanDaTox collection
for query gene PC1_0682 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012912  Dd1591_3231  Rhamnogalacturonate lyase  59.47 
 
 		 580 aa  691    Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_0682  Rhamnogalacturonate lyase  100 
 
 		 576 aa  1189    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_0910  Rhamnogalacturonate lyase  90.8 
 
 		 571 aa  1085    Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_2152  Rhamnogalacturonate lyase  51.13 
 
 		 605 aa  627  1e-178  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
BN001301  ANIA_06395  Rhamnogalacturonan lyase [Source:UniProtKB/TrEMBL;Acc:Q1HFS3]  26.09 
 
 		 664 aa  89.7  1e-16  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.824866  normal  0.241878 
 
 
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BN001302  ANIA_04139  rhamnogalacturonan lyase (Eurofung)  24.04 
 
 		 1041 aa  87  9e-16  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.839172  normal  0.276686 
 
 
-
 
NC_006691  CNF04250  expressed protein  24.52 
 
 		 606 aa  81.6  0.00000000000004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.583211  n/a   
 
 
-
 
NC_010717  PXO_02430  rhamnogalacturonase B  24.35 
 
 		 533 aa  70.5  0.00000000009  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.521572  n/a   
 
 
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NC_010571  Oter_2208  beta strand repeat-containing protein  24.44 
 
 		 1869 aa  57.4  0.0000007  Opitutus terrae PB90-1  Bacteria  normal  0.848116  normal  0.0253068 
 
 
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